Paralogue Annotation for CACNA1C residue 1750

Residue details

Gene: CACNA1C
Reference Sequences: LRG: LRG_334, Ensembl variant: ENST00000399655 / ENSP00000382563
Amino Acid Position: 1750
Reference Amino Acid: D - Aspartate
Protein Domain: C-terminus


Paralogue Variants mapped to CACNA1C residue 1750

ParalogueVariantAssociated DiseaseMapping QualityConsensusPubmed
SCN1AM1977LAcute encephalopathy Low1 22309220

To assess whether the paralogue annotation here confidently predicts that variation at this residue is pathogenic, it is important to check the reports in the Pubmed links above to ascertain that the mutations in these paralogues have been proved likely to be disease-causing. It is also important to check that the direction of effect of the variant in the paralogue is compatible with your observed phenotype in CACNA1C.



CACNA1C----QRPLHINKAGSS-QGDTESPSHEKLV>D<STFTPSSY-------SSTGSNANI--NNAN1771
CACNA1A------------------------------>-<------------------------------
CACNA1B------------------------------>-<------------------------------
CACNA1D----HRPLHVQRPSIPPASDTEKPLFPPAG>N<SVCHNHHNHNSIGKQVPTSTNANL--NNAN1782
CACNA1E------------------------------>-<------------------------------
CACNA1F----PDSLSFG---P----------SDDDR>G<---------------TPTSSQPSV--PQAG1714
CACNA1G---ADT-----------SYILQLPKDAPHL>L<QPHS-APT--------WGTIPKLPPPG---2121
CACNA1H---GGE-----------EAEASDPADEEVS>H<ITSS-ACP--------WQPTAEPH------2118
CACNA1IRSPRVN-----------CTLLRQATGSDTS>L<DASP-SSS--------AGSL-QTTLED---2034
CACNA1S----QRPLQFAEIE---MEEMESPVFLE-->-<D-FPQDPR-------TNPLARANT--NNAN1665
SCN10A---------------------------ETA>S<ATSF-P----------PSYESVT-------1925
SCN11A---------------------------L-->-<-----------------CNGDLS-------1779
SCN1A---------------------------DLT>M<STAACP----------PSYDRVT-------1990
SCN2A---------------------------DMT>P<STTS-P----------PSYDSVT-------1979
SCN3A---------------------------DGS>S<STTS-P----------PSYDSVT-------1974
SCN4A---------------------------EKG>E<AGDA-G----------PTMGLMP-------1809
SCN5A---------------------------SSI>S<STSF-P----------PSYDSVT-------1981
SCN7A------------------------------>-<------------------------------
SCN8A---------------------------EST>P<STAS-L----------PSYDSVT-------1951
SCN9A---------------------------DAT>S<STTS-P----------PSYDSVT-------1951
cons                              > <                              

See full Alignment of Paralogues


Known Variants in CACNA1C

There are currently no reported variants at residue 1750 for CACNA1C.