Paralogue Annotation for CACNA1C residue 338

Residue details

Gene: CACNA1C
Reference Sequences: LRG: LRG_334, Ensembl variant: ENST00000399655 / ENSP00000382563
Amino Acid Position: 338
Reference Amino Acid: G - Glycine
Protein Domain: TM domain 1


Paralogue Variants mapped to CACNA1C residue 338

ParalogueVariantAssociated DiseaseMapping QualityConsensusPubmed
CACNA1AG293RSpinocerebellar ataxia 6High9 9345107, 11742003
SCN1AN357IDravet syndromeMedium9 18930999

To assess whether the paralogue annotation here confidently predicts that variation at this residue is pathogenic, it is important to check the reports in the Pubmed links above to ascertain that the mutations in these paralogues have been proved likely to be disease-causing. It is also important to check that the direction of effect of the variant in the paralogue is compatible with your observed phenotype in CACNA1C.



CACNA1C--DPSPCALETGHGRQ-CQN-GTVCKPGWD>G<PKHGITNFDNFAFAMLTVFQCITMEGWTDV368
CACNA1A--SPAPCGTEEPA-RT-C-PNGTKCQPYWE>G<PNNGITQFDNILFAVLTVFQCITMEGWTDL323
CACNA1B--GDFPCGKEAPA-RL-C-EGDTECREYWP>G<PNFGITNFDNILFAILTVFQCITMEGWTDI319
CACNA1D--DPAPCAFSGNGR-Q-CTANGTECRSGWV>G<PNGGITNFDNFAFAMLTVFQCITMEGWTDV369
CACNA1E--PPHPCGVQG------C-PAGYEC-KDWI>G<PNDGITQFDNILFAVLTVFQCITMEGWTTV314
CACNA1F--DPSPCASSGSGR-A-CTLNQTECRGRWP>G<PNGGITNFDNFFFAMLTVFQCVTMEGWTDV335
CACNA1G--------SSNTTC-VNWNQYYTNCSAGEH>N<PFKGAINFDNIGYAWIAIFQVITLEGWVDI359
CACNA1H--QAEGVGAARNAC-INWNQYYNVCRSGDS>N<PHNGAINFDNIGYAWIAIFQVITLEGWVDI383
CACNA1I--AGRQDLNASGLC-VNWNRYYNVCRTGSA>N<PHKGAINFDNIGYAWIVIFQVITLEGWVEI362
CACNA1S--EPSPCARTGSGR-R-CTINGSECRGGWP>G<PNHGITHFDNFGFSMLTVYQCITMEGWTDV297
SCN10ATSDPLLCGNGSDSG-H-C-PDGYICLKTSD>N<PDFNYTSFDSFAWAFLSLFRLMTQDSWERL361
SCN11ASPEFKMCGIWMGNS-A-C-SIQYECKHTKI>N<PDYNYTNFDNFGWSFLAMFRLMTQDSWEKL364
SCN1AFLDALLCGNSSDAG-Q-C-PEGYMCVKAGR>N<PNYGYTSFDTFSWAFLSLFRLMTQDFWENL387
SCN2AQNDALLCGNSSDAG-Q-C-PEGYICVKAGR>N<PNYGYTSFDTFSWAFLSLFRLMTQDFWENL389
SCN3AQKDPLLCGNGSDAG-Q-C-PEGYICVKAGR>N<PNYGYTSFDTFSWAFLSLFRLMTQDYWENL388
SCN4ASNDALLCGNSSDAG-H-C-PEGYECIKTGR>N<PNYGYTSYDTFSWAFLALFRLMTQDYWENL411
SCN5ATSDVLLCGNSSDAG-T-C-PEGYRCLKAGE>N<PDHGYTSFDSFAWAFLALFRLMTQDCWERL377
SCN7AERYALLCGNRTDAG-Q-C-PEGYVCVKAGI>N<PDQGFTNFDSFGWALFALFRLMAQDYPEVL358
SCN8AMLEPLLCGNSSDAG-Q-C-PEGYQCMKAGR>N<PNYGYTSFDTFSWAFLALFRLMTQDYWENL375
SCN9ASKDALLCGFSTDSG-Q-C-PEGYTCVKIGR>N<PDYGYTSFDTFSWAFLALFRLMTQDYWENL366
cons                              > <                              

See full Alignment of Paralogues


Known Variants in CACNA1C

There are currently no reported variants at residue 338 for CACNA1C.