Paralogue Annotation for CACNA1C residue 675

Residue details

Gene: CACNA1C
Reference Sequences: LRG: LRG_334, Ensembl variant: ENST00000399655 / ENSP00000382563
Amino Acid Position: 675
Reference Amino Acid: G - Glycine
Protein Domain: TM domain 2


Paralogue Variants mapped to CACNA1C residue 675

ParalogueVariantAssociated DiseaseMapping QualityConsensusPubmed
CACNA1AG638DEpisodic ataxia 2High9 19232643
SCN2AK905NEpileptic encephalopathyMedium9 23708187

To assess whether the paralogue annotation here confidently predicts that variation at this residue is pathogenic, it is important to check the reports in the Pubmed links above to ascertain that the mutations in these paralogues have been proved likely to be disease-causing. It is also important to check that the direction of effect of the variant in the paralogue is compatible with your observed phenotype in CACNA1C.



CACNA1CLNSVRSIASLLLLLFLFIIIFSLLGMQLFG>G<KFNFD-E------------MQTRRSTFDNF692
CACNA1ALNSMKSIISLLFLLFLFIVVFALLGMQLFG>G<QFNFD-E------------G-TPPTNFDTF654
CACNA1BLNSMKSIISLLFLLFLFIVVFALLGMQLFG>G<QFNFQ-D------------E-TPTTNFDTF650
CACNA1DLNSMKSIASLLLLLFLFIIIFSLLGMQLFG>G<KFNFD-E------------TQTKRSTFDNF711
CACNA1EMSSMKSIISLLFLLFLFIVVFALLGMQLFG>G<RFNFN-D------------G-TPSANFDTF643
CACNA1FLNSMKSIASLLLLLFLFIIIFSLLGMQLFG>G<KFNFD-Q------------THTKRSTFDTF697
CACNA1GMKTMDNVATFCMLLMLFIFIFSILGMHLFG>C<KFASER---------DG-DTLPDRKNFDSL909
CACNA1HVKTMDNVATFCTLLMLFIFIFSILGMHLFG>C<KFSLKTD--------TG-DTVPDRKNFDSL960
CACNA1IMKTMDNVATFCMLLMLFIFIFSILGMHIFG>C<KFSLRTD--------TG-DTVPDRKNFDSL807
CACNA1SLNSIRSIASLLLLLFLFIVIFALLGMQLFG>G<RYDFE-D------------TEVRRSNFDNF600
SCN10AGNSVGALGNLTIILAIIVFVFALVGKQLLG>E<NYRNN-RKN----I-SAPHEDWPRWHMHDF835
SCN11AGNSVGALGSLTVVLVIVIFIFSVVGMQLFG>R<SFNSQ-KSPKLCNPTGPTVSCLRHWHMGDF754
SCN1AGNSVGALGNLTLVLAIIVFIFAVVGMQLFG>K<SYKDC-VCK----I-AS-DCQLPRWHMNDF937
SCN2AGNSVGALGNLTLVLAIIVFIFAVVGMQLFG>K<SYKEC-VCK----I-SN-DCELPRWHMHDF928
SCN3AGNSVGALGNLTLVLAIIVFIFAVVGMQLFG>K<SYKEC-VCK----I-ND-DCTLPRWHMNDF929
SCN4AGNSVGALGNLTLVLAIIVFIFAVVGMQLFG>K<SYKEC-VCK----I-AL-DCNLPRWHMHDF747
SCN5AGNSVGALGNLTLVLAIIVFIFAVVGMQLFG>K<NYSEL-RDS----D-SG---LLPRWHMMDF884
SCN7ASNSWVALKDLVLLLFTFIFFSAAFGMKLFG>K<NYEEF-VCH----I-DK-DCQLPRWHMHDF674
SCN8AGNSVGALGNLTLVLAIIVFIFAVVGMQLFG>K<SYKEC-VCK----I-NQ-DCELPRWHMHDF922
SCN9AGNSVGALGNLTLVLAIIVFIFAVVGMQLFG>K<SYKEC-VCK----I-ND-DCTLPRWHMNDF902
cons                              > <                              

See full Alignment of Paralogues


Known Variants in CACNA1C

There are currently no reported variants at residue 675 for CACNA1C.