Paralogue Annotation for KCNE2 residue 121

Residue details

Gene: KCNE2
Reference Sequences: LRG: LRG_291, Ensembl variant: ENST00000290310 / ENSP00000290310
Amino Acid Position: 121
Reference Amino Acid: M - Methionine
Protein Domain: C-terminus


Paralogue Variants mapped to KCNE2 residue 121

ParalogueVariantAssociated DiseaseMapping QualityConsensusPubmed
KCNE1P127TLong QT syndromeMedium8 10973849, 15051636, 24912595, 25037568

To assess whether the paralogue annotation here confidently predicts that variation at this residue is pathogenic, it is important to check the reports in the Pubmed links above to ascertain that the mutations in these paralogues have been proved likely to be disease-causing. It is also important to check that the direction of effect of the variant in the paralogue is compatible with your observed phenotype in KCNE2.



KCNE2------EE-----SKATIHE--NIGAAGFK>M<S----------------P123
KCNE1------EN-----HLAIEQP--NTHLPETK>P<S----------------P129
KCNE3-------------RVSM------------->-<-----------------I103
KCNE4GDSVSSESSSPDVHLTIQEEGADDELEETS>E<TPLNESSEGSSENIHQNS170
cons                              > <                  

See full Alignment of Paralogues


Known Variants in KCNE2

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.M121Kc.362T>A Inherited ArrhythmiaLQTSSIFT:
Polyphen:
ReportsInherited ArrhythmiaLQTS Results of genetic testing in 855 consecutive unrelated patients referred for long QT syndrome in a clinical laboratory. Genet Test Mol Biomarkers. 2013 17(7):553-61. doi: 10.1089/gtmb.2012.0118. 23631430