Paralogue Annotation for KCNH2 residue 78

Residue details

Gene: KCNH2
Reference Sequences: LRG: LRG_288, Ensembl variant: ENST00000262186 / ENSP00000262186
Amino Acid Position: 78
Reference Amino Acid: A - Alanine
Protein Domain: N-terminus


Paralogue Variants mapped to KCNH2 residue 78

No paralogue variants have been mapped to residue 78 for KCNH2.



KCNH2FCELCGYSRAEVMQRPCTCDFLHGPRTQRR>A<AAQ-IAQ-----------------------84
KCNH1FCKLSGYHRAEVMQKSSTCSFMYGELTDKD>T<IEK-VRQ-----------------------85
KCNH3FCDLTGFSRAEVMQRGCACSFLYGPDTSEL>V<RQQ-IRK-----------------------85
KCNH4FCELTGYGRTEVMQKTCSCRFLYGPETSEP>A<LQR-LHK-----------------------85
KCNH5FCKLSGYHRADVMQKSSTCSFMYGELTDKK>T<IEK-VRQ-----------------------83
KCNH6FCELFGYSRVEVMQQPCTCDFLTGPNTPSS>A<VSR-LAQ-----------------------84
KCNH7FCEMTGFSRPDVMQKPCTCDFLHGPETKRH>D<IAQ-IAQ-----------------------84
KCNH8FCELAGFARTEVMQKSCSCKFLFGVETNEQ>L<MLQ-IEK-----------------------85
CNGA1------------------------------>-<--G-ACS-----------------------40
CNGA2HA------PPA-----------IKANGK-D>D<HRT-SSR-----------------------37
CNGA3----------------------RDLNRA-E>N<--G-LSR-----------------------34
CNGA4------------------------------>-<------------------------------
CNGB1---------------DPAQILGHGSTGDTG>C<TDE-PNE-----------------------145
CNGB3------------------------------>-<------------------------------
HCN1------------------------------>-<------------------------------
HCN2------------------------------>-<------------------------------
HCN3------------------------------>-<------------------------------
HCN4EEEG-AGGRQDPSRRSIRLRPLPSPSPSAA>A<GGTESRSSALGAADSEGPARGAGKSSTNGD92
cons                              > <                              

See full Alignment of Paralogues


Known Variants in KCNH2

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.A78Pc.232G>C Inherited ArrhythmiaLQTSSIFT: tolerated
Polyphen: benign
ReportsInherited ArrhythmiaLQTS Long QT syndrome-associated mutations in the Per-Arnt-Sim (PAS) domain of HERG potassium channels accelerate channel deactivation. J Biol Chem. 1999 274(15):10113-8. 10187793
Inherited ArrhythmiaLQTS Spectrum of mutations in long-QT syndrome genes. KVLQT1, HERG, SCN5A, KCNE1, and KCNE2. Circulation. 2000 102(10):1178-85. 10973849
Inherited ArrhythmiaLQTS Increased risk of arrhythmic events in long-QT syndrome with mutations in the pore region of the human ether-a-go-go-related gene potassium channel. Circulation. 2002 105(7):794-9. 11854117
Inherited ArrhythmiaLQTS Compendium of cardiac channel mutations in 541 consecutive unrelated patients referred for long QT syndrome genetic testing. Heart Rhythm. 2005 2(5):507-17. 15840476
Inherited ArrhythmiaLQTS Genetic testing for long-QT syndrome: distinguishing pathogenic mutations from benign variants. Circulation. 2009 120(18):1752-60. 19841300
Inherited ArrhythmiaLQTS Rescue of aberrant gating by a genetically encoded PAS (Per-Arnt-Sim) domain in several long QT syndrome mutant human ether-รก-go-go-related gene potassium channels. J Biol Chem. 2011 286(25):22160-9. 21536673
Inherited ArrhythmiaLQTS Changes in channel trafficking and protein stability caused by LQT2 mutations in the PAS domain of the HERG channel. PLoS One. 2012 7(3):e32654. 22396785
Inherited ArrhythmiaLQTS Phylogenetic and physicochemical analyses enhance the classification of rare nonsynonymous single nucleotide variants in type 1 and 2 long-QT syndrome. Circ Cardiovasc Genet. 2012 5(5):519-28. doi: 10.1161/CIRCGENETICS.112.963785. 22949429
Inherited ArrhythmiaLQTS An in vivo cardiac assay to determine the functional consequences of putative long QT syndrome mutations. Circ Res. 2013 112(5):826-30. doi: 10.1161/CIRCRESAHA.112.300664. 23303164
Inherited ArrhythmiaLQTS Large-scale mutational analysis of Kv11.1 reveals molecular insights into type 2 long QT syndrome. Nat Commun. 2014 5:5535. doi: 10.1038/ncomms6535. 25417810
p.A78Vc.233C>T Inherited ArrhythmiaLQTSSIFT:
Polyphen:
ReportsInherited ArrhythmiaLQTS Genetic characteristics of children and adolescents with long-QT syndrome diagnosed by school-based electrocardiographic screening programs. Circ Arrhythm Electrophysiol. 2014 7(1):107-12. doi: 10.1161/CIRCEP.113.000426. 24363352