Paralogue Annotation for SCN5A residue 1000

Residue details

Gene: SCN5A
Reference Sequences: LRG: LRG_289, Ensembl variant: ENST00000333535 / ENSP00000328968
Amino Acid Position: 1000
Reference Amino Acid: Q - Glutamine
Protein Domain: Interdomain Linker II-III


Paralogue Variants mapped to SCN5A residue 1000

No paralogue variants have been mapped to residue 1000 for SCN5A.



SCN5A-------GLLRQ-RPQKPAALA-A----QG>Q<LPSCIATPYSPPP-PETEKVPPTRKETRFE1029
SCN1A-------QSFIR-KQKILDEIK-PLDDLNN>K<KDSCMSNHT--------AEIGKDLDYLKDV1079
SCN2A-------KAFVR-KQKALDEIK-PLEDLNN>K<KDSCISNHT-------TIEIGKDLNYLKDG1071
SCN3A-------KAFFR-KPKVI-EIH-E----GN>K<IDSCMSNNT-------GIEISKELNYLRDG1067
SCN4A-------GKILS-PKDIMLSLG-EADGAGE>A<GEAGETAPE-------DEKKEPPEEDLKKD890
SCN7A-------NVP-------KDTMD-HVNEVYV>K<ED--ISDHTL-------SELSNTQDFLKDK808
SCN8A-------AHFKQ-R--EADEVK-PLDELYE>K<KANCIANHT-------GADIHRNGDFQKNG1063
SCN9A-------KAFSK-KPKISREIR-QAEDLNT>K<KENYISNHT-------LAEMSKGHNFLKEK1045
SCN10A-------RSCPFPQPKAEPELVVKLPLSSS>K<AENHIAANT--------------------A967
SCN11A-------KWCRK-Q-NLPQQ--------KE>V<AGGCAAQ---------SKDIIPLVMEMKRG890
CACNA1A-RKQNLLASREA-L-------Y-NEMDPDE>R<WKAAYTR-HLRPDMKTHLDRPLVVDPQENR832
CACNA1B-RLQNLRASCEA-L-------Y-SEMDPEE>R<LRFATTR-HLRPDMKTHLDRPLVVELGRDG826
CACNA1C------------------------------>-<------------------------------
CACNA1D------------------------------>-<------------------------------
CACNA1E-RKHMQMSSQEA-L-------N-REEAPTM>N<PLNPLNP-LSSL-------NPLNAHPSLYR828
CACNA1F------------------------------>-<------------------------------
CACNA1GLALVSLGEHPEL-R-------K-SLLPPLI>I<HTAATPM-SLPKSTSTGLGEALGPASRRTS1070
CACNA1HSLAVTPNGHLEG-R-------G-SLSPPLI>M<CTAATPM-PTPKS-SPFLDAAPSLPDSRRG1106
CACNA1IPIPMTPNGHLDP-S-------L-PLGGHLG>P<AGAAGPA-P--RL-SLQPDPMLVALGSRKS952
CACNA1S------------------------------>-<------------------------------
cons                              > <                              

See full Alignment of Paralogues


Known Variants in SCN5A

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.Q1000Lc.2999A>T Putative BenignSIFT:
Polyphen: