Paralogue Annotation for SCN5A residue 1273

Residue details

Gene: SCN5A
Reference Sequences: LRG: LRG_289, Ensembl variant: ENST00000333535 / ENSP00000328968
Amino Acid Position: 1273
Reference Amino Acid: W - Tryptophan
Protein Domain: TM Domain 3


Paralogue Variants mapped to SCN5A residue 1273

No paralogue variants have been mapped to residue 1273 for SCN5A.



SCN5ATYVFVLEMLLKWVAYGF----KKYFTNAWC>W<LDFLIVDVSLVSLVAN-T----LGFAEMGP1298
SCN1ATYIFILEMLLKWVAYGY----QTYFTNAWC>W<LDFLIVDVSLVSLTAN-A----LGYSELGA1311
SCN2ATYIFILEMLLKWVAYGF----QVYFTNAWC>W<LDFLIVDVSLVSLTAN-A----LGYSELGA1301
SCN3ATYIFILEMLLKWVAYGF----QTYFTNAWC>W<LDFLIVDVSLVSLVAN-A----LGYSELGA1299
SCN4ATYIFIMEMLLKWVAYGF----KVYFTNAWC>W<LDFLIVDVSIISLVAN-W----LGYSELGP1124
SCN7ATYIFILEMLLKWMAYGF----KAYFSNGWY>R<LDFVVVIVFCLSLIGK-T----RE--E---1022
SCN8ATYIFILEMLLKWTAYGF----VKFFTNAWC>W<LDFLIVAVSLVSLIAN-A----LGYSELGA1291
SCN9ATYIFILEMLLKWIAYGY----KTYFTNAWC>W<LDFLIVDVSLVTLVAN-T----LGYSDLGP1274
SCN10ATFIFVFEMLLKWVAYGF----KKYFTNAWC>W<LDFLIVNISLISLTAK-I----LEYSEVAP1245
SCN11ATHIFILEMVLKWVAFGF----GKYFTSAWC>C<LDFIIVIVSVTTLI---------N---LME1142
CACNA1ATGVFTFEMVIKMIDLGLVLHQGAYFRDLWN>I<LDFIVVSGALVAFAFTGN----SKGKDINT1341
CACNA1BTGVFTFEMVIKMIDLGLLLHPGAYFRDLWN>I<LDFIVVSGALVAFAFS-G----SKGKDINT1247
CACNA1CTTIFTIEIALKMTAYGAFLHKGSFCRNYFN>I<LDLLVVSVSLISF----G----IQSSAINV993
CACNA1DTAIFTVEILLKMTTFGAFLHKGAFCRNYFN>L<LDMLVVGVSLVSF----G----IQSSAISV999
CACNA1ETGVFTFEMVIKMIDQGLILQDGSYFRDLWN>I<LDFVVVVGALVAFALANA-LGTNKGRDIKT1253
CACNA1FTSIFTVEILLKMTVFGAFLHRGSFCRSWFN>M<LDLLVVSVSLISF----G----IHSSAISV964
CACNA1GTAVFLAEMTVKVVALGWCFGEQAYLRSSWN>V<LDGLLVLISVIDILVS-MVSD-SGTKILGM1376
CACNA1HTAIFVAEMMVKVVALGLLSGEHAYLQSSWN>L<LDGLLVLVSLVDIVVA-MASA-GGAKILGV1394
CACNA1ITAIFVGEMTLKVVSLGLYFGEQAYLRSSWN>V<LDGFLVFVSIIDIVVS-LASA-GGAKILGV1270
CACNA1STSVFTVEIVLKMTTYGAFLHKGSFCRNYFN>M<LDLLVVAVSLISM----G----LESSAISV892
cons                              > <                              

See full Alignment of Paralogues


Known Variants in SCN5A

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.W1273Cc.3819G>T Putative BenignSIFT:
Polyphen: