Paralogue Annotation for SCN5A residue 1437

Residue details

Gene: SCN5A
Reference Sequences: LRG: LRG_289, Ensembl variant: ENST00000333535 / ENSP00000328968
Amino Acid Position: 1437
Reference Amino Acid: Q - Glutamine
Protein Domain: TM Domain 3


Paralogue Variants mapped to SCN5A residue 1437

ParalogueVariantAssociated DiseaseMapping QualityConsensusPubmed
SCN1AQ1450RMyoclonic epilepsy of infancyHigh9 12083760
SCN1AQ1450KDravet syndromeHigh9 19589774
SCN1AQ1450PGeneralized epilepsy with febrile seizures plusHigh9

To assess whether the paralogue annotation here confidently predicts that variation at this residue is pathogenic, it is important to check the reports in the Pubmed links above to ascertain that the mutations in these paralogues have been proved likely to be disease-causing. It is also important to check that the direction of effect of the variant in the paralogue is compatible with your observed phenotype in SCN5A.



SCN5AAGYLALLQVATFKGWMDIMYAAVDSRGYEE>Q<PQWEYNLYMYIYFVIFIIFGSFFTLNLFIG1467
SCN1AFGYLSLLQVATFKGWMDIMYAAVDSRNVEL>Q<PKYEESLYMYLYFVIFIIFGSFFTLNLFIG1480
SCN2ALGYLSLLQVATFKGWMDIMYAAVDSRNVEL>Q<PKYEDNLYMYLYFVIFIIFGSFFTLNLFIG1470
SCN3AAGYLALLQVATFKGWMDIMYAAVDSRDVKL>Q<PVYEENLYMYLYFVIFIIFGSFFTLNLFIG1465
SCN4ALGYLSLLQVATFKGWMDIMYAAVDSREKEE>Q<PQYEVNLYMYLYFVIFIIFGSFFTLNLFIG1292
SCN7ANGFLSLLQVATFNGWITIMNSAIDSVAVNI>Q<PHFEVNIYMYCYFINFIIFGVFLPLSMLIT1190
SCN8AAGYLALLQVATFKGWMDIMYAAVDSRKPDE>Q<PKYEDNIYMYIYFVIFIIFGSFFTLNLFIG1461
SCN9ALGYLSLLQVATFKGWTIIMYAAVDSVNVDK>Q<PKYEYSLYMYIYFVVFIIFGSFFTLNLFIG1443
SCN10AMGYLALLQVATFKGWMDIMYAAVDSREVNM>Q<PKWEDNVYMYLYFVIFIIFGGFFTLNLFVG1415
SCN11ANAYLALLQVATFKGWMDIIYAAVDSTEKEQ>Q<PEFESNSLGYIYFVVFIIFGSFFTLNLFIG1305
CACNA1AWALLTLFTVSTGEGWPQVLKHSVDATFENQ>G<PSPGYRMEMSIFYVVYFVVFPFFFVNIFVA1508
CACNA1BWALLTLFTVSTGEGWPMVLKHSVDATYEEQ>G<PSPGYRMELSIFYVVYFVVFPFFFVNIFVA1414
CACNA1CAAMMALFTVSTFEGWPELLYRSIDSHTEDK>G<PIYNYRVEISIFFIIYIIIIAFFMMNIFVG1163
CACNA1DSAMMALFTVSTFEGWPALLYKAIDSNGENI>G<PIYNHRVEISIFFIIYIIIVAFFMMNIFVG1169
CACNA1EWALLTLFTVSTGEGWPQVLQHSVDVTEEDR>G<PSRSNRMEMSIFYVVYFVVFPFFFVNIFVA1420
CACNA1FSAMMALFTVSTFEGWPALLYKAIDAYAEDH>G<PIYNYRVEISVFFIVYIIIIAFFMMNIFVG1134
CACNA1GQALMSLFVLASKDGWVDIMYDGLDAVGVDQ>Q<PIMNHNPWMLLYFISFLLIVAFFVLNMFVG1534
CACNA1HQALMSLFVLSSKDGWVNIMYDGLDAVGVDQ>Q<PVQNHNPWMLLYFISFLLIVSFFVLNMFVG1552
CACNA1IQALMSLFVLASKDGWVNIMYNGLDAVAVDQ>Q<PVTNHNPWMLLYFISFLLIVSFFVLNMFVG1428
CACNA1SSAMMSLFTVSTFEGWPQLLYKAIDSNAEDV>G<PIYNNRVEMAIFFIIYIILIAFFMMNIFVG1062
cons                              > <                              

See full Alignment of Paralogues


Known Variants in SCN5A

There are currently no reported variants at residue 1437 for SCN5A.