Paralogue Annotation for SCN5A residue 1870

Residue details

Gene: SCN5A
Reference Sequences: LRG: LRG_289, Ensembl variant: ENST00000333535 / ENSP00000328968
Amino Acid Position: 1870
Reference Amino Acid: A - Alanine
Protein Domain: C-terminus


Paralogue Variants mapped to SCN5A residue 1870

No paralogue variants have been mapped to residue 1870 for SCN5A.



SCN5AD-RIHCMDILFAFTKRVLGES--G---EMD>A<LKIQMEEKFMA---ANP-SKISYEPITTTL1896
SCN1AD-RIHCLDILFAFTKRVLGES--G---EMD>A<LRIQMEERFMA---SNP-SKVSYQPITTTL1910
SCN2AD-RIHCLDILFAFTKRVLGES--G---EMD>A<LRIQMEERFMA---SNP-SKVSYEPITTTL1900
SCN3AD-RIHCLDILFAFTKRVLGES--G---EMD>A<LRIQMEDRFMA---SNP-SKVSYEPITTTL1895
SCN4AD-KIHCLDILFALTKEVLGDS--G---EMD>A<LKQTMEEKFMA---ANP-SKVSYEPITTTL1722
SCN7AD-RIHCLDILLAFTKRVMGQD--V---RME>K<VVSEIESGFLL---ANP-FKITCEPITTTL1620
SCN8AD-RIHCLDILFAFTKRVLGDS--G---ELD>I<LRQQMEERFVA---SNP-SKVSYEPITTTL1890
SCN9AD-RIHCLDILFAFTKRVLGES--G---EMD>S<LRSQMEERFMS---ANP-SKVSYEPITTTL1873
SCN10AD-KIHCLDILFAFTKNVLGES--G---ELD>S<LKANMEEKFMA---TNL-SKSSYEPIATTL1846
SCN11AD-RLHCMDILFAFTARVLGGS--D---GLD>S<MKAMMEEKFME---ANP-LKKLYEPIVTTT1728
CACNA1A-NTVHFNSTLMALIRTALDIKIAKGGADKQ>Q<MDAELRKEMMAIW-PNL-SQKTLDLLVTPH1946
CACNA1BDMTVHFTSTLMALIRTALEIKLAPAGTKQH>Q<CDAELRKEISVVW-ANL-PQKTLDLLVPPH1845
CACNA1CG-TVMFNATLFALVRTALRIKTEG---NLE>Q<ANEELRAIIKKIW-KRT-SMKLLDQVVPPA1608
CACNA1DG-TVMFNATLFALVRTALKIKTEG---NLE>Q<ANEELRAVIKKIW-KKT-SMKLLDQVVPPA1616
CACNA1E-MTVHFTSTLMALIRTALDIKIAKGGADRQ>Q<LDSELQKETLAIW-PHL-SQKMLDLLVPMP1858
CACNA1FG-TVTFNATLFALVRTSLKIKTEG---NLE>Q<ANQELRIVIKKIW-KRM-KQKLLDEVIPPP1573
CACNA1G-RSASHFSLEHPTDRQLFDTI---S--LLI>Q<GSLEWELKLMDEL-AGPGGQPSAFPSAPSL1969
CACNA1H------------LVARKV------------>-<---SVSRML-SLPNDSYM----FRPVVPAS1941
CACNA1I-N--LWLDSVSLIIKDSL------------>-<---EGELTIIDNL-SGSI----FHHYSSPA1836
CACNA1SG-TVTFNATLFALVRTALKIKTEG---NFE>Q<ANEELRAIIKKIW-KRT-SMKLLDQVIPPI1513
cons                              > <                              

See full Alignment of Paralogues


Known Variants in SCN5A

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.A1870Tc.5608G>A Inherited ArrhythmiaLQTSSIFT:
Polyphen:
ReportsInherited ArrhythmiaLQTS Results of genetic testing in 855 consecutive unrelated patients referred for long QT syndrome in a clinical laboratory. Genet Test Mol Biomarkers. 2013 17(7):553-61. doi: 10.1089/gtmb.2012.0118. 23631430
p.A1870Dc.5609C>A UnknownSIFT: deleterious
Polyphen: probably damaging
p.Ala1870Aspc.5609C>A UnknownSIFT:
Polyphen: