Paralogue Annotation for SCN5A residue 1968

Residue details

Gene: SCN5A
Reference Sequences: LRG: LRG_289, Ensembl variant: ENST00000333535 / ENSP00000328968
Amino Acid Position: 1968
Reference Amino Acid: I - Isoleucine
Protein Domain: C-terminus


Paralogue Variants mapped to SCN5A residue 1968

No paralogue variants have been mapped to residue 1968 for SCN5A.



SCN5A----------------------------SS>I<SSTSF-P----------PSYDSVT------1981
SCN1A----------------------------DL>T<MSTAACP----------PSYDRVT------1990
SCN2A----------------------------DM>T<PSTTS-P----------PSYDSVT------1979
SCN3A----------------------------DG>S<SSTTS-P----------PSYDSVT------1974
SCN4A----------------------------EK>G<EAGDA-G----------PTMGLMP------1809
SCN7A------------------------------>-<------------------------------
SCN8A----------------------------ES>T<PSTAS-L----------PSYDSVT------1951
SCN9A----------------------------DA>T<SSTTS-P----------PSYDSVT------1951
SCN10A----------------------------ET>A<SATSF-P----------PSYESVT------1925
SCN11A----------------------------L->-<------------------CNGDLS------1779
CACNA1A------------------------------>-<------------------------------
CACNA1B------------------------------>-<------------------------------
CACNA1C-----QRPLHINKAGSS-QGDTESPSHEKL>V<DSTFTPSSY-------SSTGSNANI--NNA1770
CACNA1D-----HRPLHVQRPSIPPASDTEKPLFPPA>G<NSVCHNHHNHNSIGKQVPTSTNANL--NNA1781
CACNA1E------------------------------>-<------------------------------
CACNA1F-----PDSLSFG---P----------SDDD>R<G---------------TPTSSQPSV--PQA1713
CACNA1G----ADT-----------SYILQLPKDAPH>L<LQPHS-APT--------WGTIPKLPPPG--2121
CACNA1H----GGE-----------EAEASDPADEEV>S<HITSS-ACP--------WQPTAEPH-----2118
CACNA1ILRSPRVN-----------CTLLRQATGSDT>S<LDASP-SSS--------AGSL-QTTLED--2034
CACNA1S-----QRPLQFAEIE---MEEMESPVFLE->-<-D-FPQDPR-------TNPLARANT--NNA1664
cons                              > <                              

See full Alignment of Paralogues


Known Variants in SCN5A

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.I1968Mc.5904C>G Putative BenignSIFT: tolerated
Polyphen: benign
ReportsPutative Benign Genetic testing for long-QT syndrome: distinguishing pathogenic mutations from benign variants. Circulation. 2009 120(18):1752-60. 19841300
Putative Benign An international compendium of mutations in the SCN5A-encoded cardiac sodium channel in patients referred for Brugada syndrome genetic testing. Heart Rhythm. 2010 7(1):33-46. 20129283
p.I1968Sc.5903T>G Inherited ArrhythmiaBrSSIFT: tolerated
Polyphen: benign
ReportsInherited ArrhythmiaBrS Cardiac histological substrate in patients with clinical phenotype of Brugada syndrome. Circulation. 2005 112(24):3680-7. 16344400
Inherited ArrhythmiaBrS High prevalence of genetic variants previously associated with Brugada syndrome in new exome data. Clin Genet. 2013 23414114
Inherited ArrhythmiaBrS Actionable, pathogenic incidental findings in 1,000 participants' exomes. Am J Hum Genet. 2013 93(4):631-40. doi: 10.1016/j.ajhg.2013.08.006. 24055113
Unknown Actionable exomic incidental findings in 6503 participants: challenges of variant classification. Genome Res. 2015 25(3):305-15. doi: 10.1101/gr.183483.114. 25637381
p.I1968Nc.5903T>A Putative BenignSIFT:
Polyphen:
p.I1968Vc.5902A>G Putative BenignSIFT:
Polyphen: