Paralogue Annotation for SCN5A residue 34

Residue details

Gene: SCN5A
Reference Sequences: LRG: LRG_289, Ensembl variant: ENST00000333535 / ENSP00000328968
Amino Acid Position: 34
Reference Amino Acid: R - Arginine
Protein Domain: N-terminus


Paralogue Variants mapped to SCN5A residue 34

No paralogue variants have been mapped to residue 34 for SCN5A.



SCN5A-LPRGTSSFRRFTRESLAAIEKRMAEK-QA>R<GSTTLQESRE-GLPEE--EAPRPQLDLQAS61
SCN1A-VPPGPDSFNFFTRESLAAIERRIAEE-KA>K<NPKPD----K-KDDDE--NGPKPNSDLEAG58
SCN2A-VPPGPDSFRFFTRESLAAIEQRIAEE-KA>K<RPKQE----RKDEDDE--NGPKPNSDLEAG59
SCN3A-VPPGPESFRLFTRESLAAIEKRAAEE-KA>K<KPKKE----Q-DNDDE--NKPKPNSDLEAG58
SCN4A-VPLGPECLRPFTRESLAAIEQRAVEE-EA>R<LQRNK----Q-MEIEE--PERKPRSDLEAG61
SCN7A-ASPEPKGLVPFTKESFELIKQHIAKT--->-<----H----N-EDHEE--EDLKPTPDLEVG47
SCN8A-APPGPDSFKPFTPESLANIERRIAES-KL>K<KPPKADGSHR-EDDED--SKPKPNSDLEAG62
SCN9A-PPPGPQSFVHFTKQSLALIEQRIAER-KS>K<EPKEE----K-KDDDE--EAPKPSSDLEAG56
SCN10A-GSLETNNFRRFTPESLVEIEKQIAAKQGT>-<KKARE-KHRE-QKDQE--EKPRPQLDLKAC60
SCN11A-IFPDERNFRPFTSDSLAAIEKRIAIQ-KE>K<KKSK-----D-QTGEV--PQPRPQLDLKAS59
CACNA1AG------------GGSGAAAGV-------->-<----VVGSG-GGRGAG--GSRQGGQ-----41
CACNA1BG------------PGGGERA---------->-<------RGG-GAGGAG--GPGPGGLQ----38
CACNA1CS------------PR-PAHANMN------->-<A-NAAAGLA----PEH--IPTPGAALSWQA54
CACNA1DD--------H--ANE-ANYARGT------->-<R-LPLSGEG----PTSQPNSSKQTVLSWQA55
CACNA1ES---------------GDGD---------->-<-----SD-Q-SRNRQG--TPVPA-------32
CACNA1FT------------PE-PSPAN--------->-<----GAGPG----PEWGLCPGP----P---33
CACNA1G-GAEESGQP-R-S---------F------->-<M--RLND------LSG--AGGRP-------32
CACNA1HAPPPGPAALVGASPESPGAPGRE------->-<A--ERGS------ELG--VSPSE-------52
CACNA1I-SPPSSSAAAPAA----------------->-<E--PGVTTE----QPG--P--RS--P----31
CACNA1S------------------------------>-<------------------------------
cons                              > <                              

See full Alignment of Paralogues


Known Variants in SCN5A

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.R34Cc.100C>T ConflictSIFT: deleterious
Polyphen: probably damaging
ReportsPutative Benign Allelic variants in long-QT disease genes in patients with drug-associated torsades de pointes. Circulation. 2002 105(16):1943-8. 11997281
Other Cardiac Phenotype Association of torsades de pointes with novel and known single nucleotide polymorphisms in long QT syndrome genes. Am Heart J. 2006 152(6):1116-22. 17161064
Other Cardiac Phenotype Novel mutation in the SCN5A gene associated with arrhythmic storm development during acute myocardial infarction. Heart Rhythm. 2007 4(8):1072-80. 17675083
Inherited ArrhythmiaLQTS Genetic predisposition and cellular basis for ischemia-induced ST-segment changes and arrhythmias. J Electrocardiol. 2007 40(6 Suppl):S26-9. 17993325
Benign Genetic testing for long-QT syndrome: distinguishing pathogenic mutations from benign variants. Circulation. 2009 120(18):1752-60. 19841300
Benign An international compendium of mutations in the SCN5A-encoded cardiac sodium channel in patients referred for Brugada syndrome genetic testing. Heart Rhythm. 2010 7(1):33-46. 20129283
Other Disease Phenotype Genetic and forensic implications in epilepsy and cardiac arrhythmias: a case series. Int J Legal Med. 2014 25119684
p.R34Hc.101G>A Putative BenignSIFT: deleterious
Polyphen: probably damaging
ReportsPutative Benign Genetic testing for long-QT syndrome: distinguishing pathogenic mutations from benign variants. Circulation. 2009 120(18):1752-60. 19841300
Putative Benign An international compendium of mutations in the SCN5A-encoded cardiac sodium channel in patients referred for Brugada syndrome genetic testing. Heart Rhythm. 2010 7(1):33-46. 20129283