Paralogue Annotation for SCN5A residue 475

Residue details

Gene: SCN5A
Reference Sequences: LRG: LRG_289, Ensembl variant: ENST00000333535 / ENSP00000328968
Amino Acid Position: 475
Reference Amino Acid: R - Arginine
Protein Domain: Interdomain Linker I-II


Paralogue Variants mapped to SCN5A residue 475

No paralogue variants have been mapped to residue 475 for SCN5A.



SCN5A-------------RSSLEMSPLAPVNSHER>R<SKRRKR----MS-SGTE-ECGEDRLPKSDS499
SCN1AEPSAAGRL----SDSSSEASKLSSKSAKER>R<NRRKKRKQKEQS-GGEE-KDE-DEFQKSES525
SCN2ADFSGAGGIGVF-SESSSVASKLSSKSEKEL>K<NRRKKKKQKEQS-GEEE-KND--RVRKSES528
SCN3ADFSGIGGLGEL-LESSSEASKLSSKSAKEW>R<NRRKKRRQREHL-EGNN-KGERDSFPKSES528
SCN4A------------------------------>-<-----------E-GGEA-DGD---------499
SCN7A------------------------------>-<------------------------------
SCN8AEEEGEEGG-GS-PRSSSEISKLSSKSAKER>R<NRRKKRKQKELS-EGEE-KGDPEKVFKSES520
SCN9ARRSRIMGL----SESSSETSKLSSKSAKER>R<NRRKKKNQKKLS-SGEE-KGDAEKLSKSES505
SCN10A-------------LHSHNGSPLTSKNASER>R<HRIKPRV----S-EGST-ED--NKSPRSDP481
SCN11A-------------LTSLETSYFTPKKRKLF>G<NKKRKS----FF-LRES-GKD--QPPGSDS484
CACNA1A------VILAEDETD--------------->-<--------------------GEQRH-----415
CACNA1B------VMLAEEDRN--------------->-<--------------------AEEKS-----411
CACNA1C------IDPENEDEG--------------->-<--------------------MD--------457
CACNA1D------IDPENEEEG--------------->-<--------------------GE--------458
CACNA1E------VMLAEENKN--------------->-<--------------------AGTSA-----406
CACNA1F------LDMEDPSAD--------------->-<--------DNLG-SM-----AE--------430
CACNA1G--RLAQVSRA--AGVR-------------->-<--------VGLLSSPAP-LGGQETQPSSSC482
CACNA1H--RSLRLYARW-QSRW-------------->-<--------RK-KVDPSA-VQGQGPGHRQRR506
CACNA1I--RALGLYQAL-QSRR-------------->-<--------QA-L-GPEAPAPAK-PGPHAKE483
CACNA1S------MDVEDFREG--------------->-<--------------------KL--------386
cons                              > <                              

See full Alignment of Paralogues


Known Variants in SCN5A

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.R475Sc.1425A>C Putative BenignSIFT: tolerated
Polyphen: benign
ReportsPutative Benign Genetic testing for long-QT syndrome: distinguishing pathogenic mutations from benign variants. Circulation. 2009 120(18):1752-60. 19841300
Putative Benign An international compendium of mutations in the SCN5A-encoded cardiac sodium channel in patients referred for Brugada syndrome genetic testing. Heart Rhythm. 2010 7(1):33-46. 20129283
p.R475Kc.1424G>A Putative BenignSIFT:
Polyphen: