Paralogue Annotation for SCN5A residue 52

Residue details

Gene: SCN5A
Reference Sequences: LRG: LRG_289, Ensembl variant: ENST00000333535 / ENSP00000328968
Amino Acid Position: 52
Reference Amino Acid: P - Proline
Protein Domain: N-terminus


Paralogue Variants mapped to SCN5A residue 52

No paralogue variants have been mapped to residue 52 for SCN5A.



SCN5AKRMAEK-QARGSTTLQESRE-GLPEE--EA>P<RPQLDLQASKKLPDLYGNPPQELIGEPLED82
SCN1ARRIAEE-KAKNPKPD----K-KDDDE--NG>P<KPNSDLEAGKNLPFIYGDIPPEMVSEPLED79
SCN2AQRIAEE-KAKRPKQE----RKDEDDE--NG>P<KPNSDLEAGKSLPFIYGDIPPEMVSVPLED80
SCN3AKRAAEE-KAKKPKKE----Q-DNDDE--NK>P<KPNSDLEAGKNLPFIYGDIPPEMVSEPLED79
SCN4AQRAVEE-EARLQRNK----Q-MEIEE--PE>R<KPRSDLEAGKNLPMIYGDPPPEVIGIPLED82
SCN7AQHIAKT--------H----N-EDHEE--ED>L<KPTPDLEVGKKLPFIYGNLSQGMVSEPLED68
SCN8ARRIAES-KLKKPPKADGSHR-EDDED--SK>P<KPNSDLEAGKSLPFIYGDIPQGLVAVPLED83
SCN9AQRIAER-KSKEPKEE----K-KDDDE--EA>P<KPSSDLEAGKQLPFIYGDIPPGMVSEPLED77
SCN10AKQIAAKQGT-KKARE-KHRE-QKDQE--EK>P<RPQLDLKACNQLPKFYGELPAELIGEPLED81
SCN11AKRIAIQ-KEKKKSK-----D-QTGEV--PQ>P<RPQLDLKASRKLPKLYGDIPRELIGKPLED80
CACNA1AV-------------VVGSG-GGRGAG--GS>R<QGGQ--------PGA-----------QRMY48
CACNA1B----------------RGG-GAGGAG--GP>G<PGGLQ-------PGQ-----------RVLY45
CACNA1CMN--------A-NAAAGLA----PEH--IP>T<PGAALSWQAAIDAARQAKLMGSAGNATIST75
CACNA1DGT--------R-LPLSGEG----PTSQPNS>S<KQTVLSWQAAIDAARQAKAAQTMSTSAPPP76
CACNA1E---------------SD-Q-SRNRQG--TP>V<PA----------SGQ-----------AAAY39
CACNA1F--------------GAGPG----PEWGLCP>G<P----P-------AV--------EGESSGA42
CACNA1G-F--------M--RLND------LSG--AG>G<RP-----------G-----------PGSA-37
CACNA1HRE--------A--ERGS------ELG--VS>P<SE-----------S-----------P-AA-56
CACNA1I----------E--PGVTTE----QPG--P->-<RS--P-------PS-----------SPPG-37
CACNA1S------------------------------>-<------------------------------
cons                              > <                              

See full Alignment of Paralogues


Known Variants in SCN5A

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.P52Sc.154C>T Inherited ArrhythmiaLQTSSIFT: deleterious
Polyphen: benign
ReportsInherited ArrhythmiaLQTS Spectrum and prevalence of mutations from the first 2,500 consecutive unrelated patients referred for the FAMILION long QT syndrome genetic test. Heart Rhythm. 2009 6(9):1297-303. 19716085
p.P52Hc.155C>A Putative BenignSIFT:
Polyphen: