Paralogue Annotation for SCN5A residue 532

Residue details

Gene: SCN5A
Reference Sequences: LRG: LRG_289, Ensembl variant: ENST00000333535 / ENSP00000328968
Amino Acid Position: 532
Reference Amino Acid: F - Phenylalanine
Protein Domain: Interdomain Linker I-II


Paralogue Variants mapped to SCN5A residue 532

No paralogue variants have been mapped to residue 532 for SCN5A.



SCN5ATRGLSRTSMKPRSSRG--SIF------T-->F<RR-----R-DLG-----SEA-------DFA544
SCN1ALSIRGSLFSPRRNSRT--SLF------S-->F<RG---RAK-DVG-----SEN-------DFA591
SCN2ALSIRGSLFSPRRNSRA--SLF------S-->F<RG---RAK-DIG-----SEN-------DFA594
SCN3ALSIRGSLFSPRRNSKT--SIF------S-->F<RG---RAK-DVG-----SEN-------DFA594
SCN4A------------------------------>-<------------------------------
SCN7A------------------------------>-<------------------------------
SCN8ALSIPGSPFLSRHNSKS--SIF------S-->F<RGPG-RFR-DPG-----SEN-------EFA584
SCN9ALSIRGSLFSARRSSRT--SLF------S-->F<KG---RGR-DIG-----SET-------EFA571
SCN10AMSFLGLASGKRRASHG--SVF------H-->F<RS---PGR-DIS-----LPE-------GVT521
SCN11A------------------------------>-<------------------------------
CACNA1A-------------PFDG-ALR------R-->T<TI---K-K---------SKT----------431
CACNA1B-------------PLDA-VLK------R-->A<AT---K-K---------SRN----------427
CACNA1C----------------EEKPR------N-->M<SM---P-----T-----SET----------471
CACNA1D----------------E-GKR------N-->T<SM---P-----T-----SET----------471
CACNA1E-------------L--E-VLR------R-->A<TI---K-R---------SRT----------420
CACNA1F----------------E-G-RAGHRPQL-->A<EL---T-NRRRGRLRWFSHS----------457
CACNA1GL-GNGTLRAPRASPEIQ-DRD------ANG>S<RRLMLP-P---------PS-TPALSGAPPG548
CACNA1HF-SHGSPRRPGPEPGAC-DTR------LVR>-<----AG-A---------PPSPPSPGRGPPD568
CACNA1IT-LHGP------------------------>-<------------------A--------SPG516
CACNA1S---------------------------S-->L<DE---G-----G-----SDT----------395
cons                              > <                              

See full Alignment of Paralogues


Known Variants in SCN5A

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.F532Cc.1595T>G Inherited ArrhythmiaBrSSIFT: deleterious
Polyphen: probably damaging
ReportsOther Cardiac Phenotype Genetic polymorphisms and haplotypes of the human cardiac sodium channel alpha subunit gene (SCN5A) in Japanese and their association with arrhythmia. Ann Hum Genet. 2005 69(Pt 4):413-28. 15996170
Other Cardiac Phenotype Cardiac ion channel gene mutations in sudden infant death syndrome. Pediatr Res. 2008 64(5):482-7. 18596570
Inherited ArrhythmiaBrS An international compendium of mutations in the SCN5A-encoded cardiac sodium channel in patients referred for Brugada syndrome genetic testing. Heart Rhythm. 2010 7(1):33-46. 20129283
p.F532Lc.1594T>C Putative BenignSIFT:
Polyphen: