Paralogue Annotation for SCN5A residue 552

Residue details

Gene: SCN5A
Reference Sequences: LRG: LRG_289, Ensembl variant: ENST00000333535 / ENSP00000328968
Amino Acid Position: 552
Reference Amino Acid: G - Glycine
Protein Domain: Interdomain Linker I-II


Paralogue Variants mapped to SCN5A residue 552

No paralogue variants have been mapped to residue 552 for SCN5A.



SCN5AR-DLG-----SEA-------DFADDENSTA>G<ESESHHTSLLVPWPL--RRT-SA---QGQP576
SCN1AK-DVG-----SEN-------DFADDEHSTF>E<DNESRRDSLFVPRRHGERRN----------619
SCN2AK-DIG-----SEN-------DFADDEHSTF>E<DNDSRRDSLFVPHRHGERRH----------622
SCN3AK-DVG-----SEN-------DFADDEHSTF>E<DSESRRDSLFVPHRHGERRN----------622
SCN4A------------------------------>-<------------------------------
SCN7A------------------------------>-<------------------------------
SCN8AR-DPG-----SEN-------EFADDEHSTV>E<ESEGRRDSLFIPIRARERRS------SYSG616
SCN9AR-DIG-----SET-------EFADDEHSIF>G<DNESRRGSLFVPHRPQERRS----------599
SCN10AR-DIS-----LPE-------GVTDDG-VFP>G<DHESHRGSLLLGGGAGQQG-----------547
SCN11A------------------------------>-<------------------------------
CACNA1AK---------SKT----------------->-<------------------------------431
CACNA1BK---------SRN----------------->-<------------------------------427
CACNA1C----T-----SET----------------->-<------------------------------471
CACNA1D----T-----SET----------------->-<------------------------------471
CACNA1ER---------SRT----------------->-<------------------------------420
CACNA1FNRRRGRLRWFSHS----------------->-<------------------------------457
CACNA1GP---------PS-TPALSGAPPGGAESVHS>F<YHADCHLEPVRCQAPP---PRSPSEASG-R582
CACNA1HA---------PPSPPSPGRGPPD-AESVHS>I<YHADCHIEGPQERARVAHAAATA-AASL-R603
CACNA1I-----------A--------SPGNDHSGRE>L<CPQHSPLDATPHTLVQPIPA----------544
CACNA1S----G-----SDT----------------->-<------------------------------395
cons                              > <                              

See full Alignment of Paralogues


Known Variants in SCN5A

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.G552Rc.1654G>C Putative BenignSIFT: deleterious
Polyphen: probably damaging
p.G552Rc.1654G>A Inherited ArrhythmiaBrSSIFT: deleterious
Polyphen: probably damaging
ReportsInherited ArrhythmiaBrS An international compendium of mutations in the SCN5A-encoded cardiac sodium channel in patients referred for Brugada syndrome genetic testing. Heart Rhythm. 2010 7(1):33-46. 20129283
Inherited ArrhythmiaBrS Brugada syndrome disease phenotype explained in apparently benign sodium channel mutations. Circ Cardiovasc Genet. 2014 7(2):123-31. doi: 10.1161/CIRCGENETICS.113.000292. 24573164
p.G552Wc.1654G>T Putative BenignSIFT: deleterious
Polyphen: probably damaging
p.G552Ac.1655G>C UnknownSIFT:
Polyphen:
ReportsUnknown Novel genotype-phenotype associations demonstrated by high-throughput sequencing in patients with hypertrophic cardiomyopathy. Heart. 2015 101(4):294-301. doi: 10.1136/heartjnl-2014-306387. 25351510