Paralogue Annotation for SCN5A residue 648

Residue details

Gene: SCN5A
Reference Sequences: LRG: LRG_289, Ensembl variant: ENST00000333535 / ENSP00000328968
Amino Acid Position: 648
Reference Amino Acid: P - Proline
Protein Domain: Interdomain Linker I-II


Paralogue Variants mapped to SCN5A residue 648

No paralogue variants have been mapped to residue 648 for SCN5A.



SCN5A--VMLEHPP--DTTTPSEEPGGPQMLTSQA>P<CVD-GFEEPGARQR-A-LSAVSVLTSA---672
SCN1A--VIIDKPATDDNGTTTETEMRKRRSSSFH>V<SMD-FLEDPSQRQR-A-MSIASILTNT---723
SCN2A-------------GTTTETEIRKRRSSSYH>V<SMD-LLEDPTSRQR-A-MSIASILTNT---714
SCN3A-------------GTTTETEVRKRRLSSYQ>I<SME-MLEDSSGRQR-A-VSIASILTNT---715
SCN4A------------------------------>-<----E---KGAPRQ-S-SSGDSGISDA---533
SCN7A---------------TIQIEMKKRSPISTD>T<SLD-VLEDATLRHK----------------461
SCN8A-------------A-TTEVEIKKKGPGSLL>V<SMD-QLASYGRKDR-I-NSIMSVVTNTL--708
SCN9A--G-----------TTNQIH-KKRRCSSYL>L<SED-MLNDPNLRQR-A-MSRASILTNT---688
SCN10A-----------GAVDVSAFD---AGQKKTF>L<SAE-YLDEPFRAQR-A-MSVVSIITSV---620
SCN11A---------------------KRLSQNLSL>D<HFD-EHGDPLQRQR-A-LSAVSILTIT---532
CACNA1A--------------D----------LLNPE>E<AED-QLA----DIA-S-VG-----------450
CACNA1B--------------D----------LIHAE>E<GED-RFA----DLC-A-VG-----------446
CACNA1C--------------E----------SVNTE>N<VAG-G-D----IEGEN-CG-----------490
CACNA1D--------------E----------SVNTE>N<VSG-EGE----NRG-C-CGSLWCWWR----497
CACNA1E--------------E----------AMTRD>S<SDE-HCV----DIS-S-VG-----------439
CACNA1F--------------T----------RS-TH>S<TSSHASL----P-A-SDTGSMTETQG----483
CACNA1G---SC--KISSPCLK----------ADSGA>C<GPD-SCP----YCA-R-AG-----AG----676
CACNA1HSGLSV--PCPLPSPP----------AGTLT>C<ELK-SCP----YCT-R-AL-----ED-P--710
CACNA1I------------------------------>-<DPA-SCP----CCQ-H-ED-----GR-RPS565
CACNA1S--------------E----------SLY-E>I<------------------------------401
cons                              > <                              

See full Alignment of Paralogues


Known Variants in SCN5A

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.P648Lc.1943C>T ConflictSIFT: tolerated
Polyphen: benign
ReportsInherited ArrhythmiaLQTS Compendium of cardiac channel mutations in 541 consecutive unrelated patients referred for long QT syndrome genetic testing. Heart Rhythm. 2005 2(5):507-17. 15840476
Inherited ArrhythmiaLQTS Genetic testing for long-QT syndrome: distinguishing pathogenic mutations from benign variants. Circulation. 2009 120(18):1752-60. 19841300
Inherited ArrhythmiaBrS An international compendium of mutations in the SCN5A-encoded cardiac sodium channel in patients referred for Brugada syndrome genetic testing. Heart Rhythm. 2010 7(1):33-46. 20129283
CardiomyopathyDCM Coding sequence mutations identified in MYH7, TNNT2, SCN5A, CSRP3, LBD3, and TCAP from 313 patients with familial or idiopathic dilated cardiomyopathy. Clin Transl Sci. 2008 1(1):21-6. 19412328
Other Disease Phenotype Loss-of-function of the voltage-gated sodium channel NaV1.5 (channelopathies) in patients with irritable bowel syndrome. Gastroenterology. 2014 146(7):1659-68. doi: 10.1053/j.gastro.2014.02.054. 24613995