CASQ2 variants in ExAC


The table below lists the CASQ2 variants found in the ExAC population database. Click on each variant for more details, including presence in the 1000 Genomes and Exome Sequencing Project databases, a breakdown by ethnic class and the variant's role in inherited cardiac disease. Use the form below to customise the variant selection. The table can be sorted by variant location, variant type or ExAC frequency.




No. Genomic coord. Variant (CDS) Variant (Protein) Variant Type ExAC frequencyPopulations*
1. 116311155 c.8G>C p.R3T missense 0.00000865
2. 116311152 c.11C>T p.T4I missense 0.00000857
3. 116311148 c.15C>G p.H5Q missense 0.00000848
4. 116311145 c.18G>T p.L6F missense 0.00000845
5. 116311129 c.34T>A p.Y12N missense 0.00000832
6. 116311099 c.64G>A p.G22R missense 0.00000825
7. 116311098 c.65G>A p.G22E missense 0.00000825
8. 116311086 c.77C>T p.P26L missense 0.00000824
9. 116311083 c.80C>T p.T27I missense 0.00000824
10. 116311071 c.92A>G p.K31R missense 0.00000824
11. 116311066 c.97C>T p.R33X nonsense 0.00000824
12. 116311065 c.98G>A p.R33Q missense 0.00000824
13. 116311060 c.103G>C p.V35L missense 0.00002472
14. 116311048 c.115G>A p.E39K missense 0.00004119
15. 116311030 c.133G>T p.V45F missense 0.00000824
16. 116311019 c.144A>C p.K48N missense 0.00003295
17. 116311018 c.145T>C p.Y49H missense 0.00000824
18. 116310990 c.173A>T p.E58V missense 0.00004942
19. 116310981 c.182C>T p.S61F missense 0.00000824
20. 116310967 c.196A>G p.T66A missense 0.32650136
21. 116310951 c.212A>C p.Q71P missense 0.00000824
22. 116310950 c.213A>C p.Q71H missense 0.00000824
23. 116310943 c.220G>T p.Glu74Ter nonsense 0.00000824
24. 116310937 c.226G>A p.V76M missense 0.02505849
25. 116310934 c.229C>T p.L77F missense 0.00000824
26. 116310927 c.234+2T>C essential splice site 0.00003295
27. 116310926 c.234+3A>G splice site 0.00000824
28. 116287533 c.235C>T p.L79F missense 0.00000871
29. 116287523 c.245A>G p.Q82R missense 0.00000860
30. 116287511 c.257A>G p.H86R missense 0.00000851
31. 116287503 c.265A>G p.I89V missense 0.00000848
32. 116287499 c.269G>A p.G90D missense 0.00000846
33. 116287487 c.281T>C p.V94A missense 0.00001685
34. 116287479 c.289A>G p.K97E missense 0.00000841
35. 116283459 c.320-10T>C splice site 0.00000854
36. 116283434 c.335G>A p.G112E missense 0.00001665
37. 116283432 c.337A>C p.S113R missense 0.00000831
38. 116283431 c.338G>A p.S113N missense 0.00004157
39. 116283408 c.361C>T p.R121C missense 0.00001652
40. 116283407 c.362G>A p.R121H missense 0.00002478
41. 116283402 c.367A>G p.I123V missense 0.00000826
42. 116283393 c.376G>C p.D126H missense 0.00000826
43. 116283389 c.380G>A p.G127D missense 0.00000826
44. 116283360 c.409T>C p.F137L missense 0.00001651
45. 116283356 c.413T>C p.L138P missense 0.00000826
46. 116283343 c.420+6T>C splice site 0.78716546
47. 116280963 c.421-7A>T splice site 0.00003295
48. 116280954 c.423A>G splice site 0.00000824
49. 116280945 c.432C>G p.D144E missense 0.00000824
50. 116280944 c.433C>T p.P145S missense 0.00002471
51. 116280928 c.449G>T p.S150I missense 0.00000824
52. 116280913 c.464T>C p.V155A missense 0.00000824
53. 116280908 c.469G>C p.A157P missense 0.00001647
54. 116280902 c.475G>A p.E159K missense 0.00023886
55. 116280902 c.475G>C p.E159Q missense 0.00000824
56. 116280902 c.475G>T p.E159X nonsense 0.00001647
57. 116280899 c.478C>T p.R160C missense 0.00001647
58. 116280898 c.479G>A p.R160H missense 0.00003295
59. 116280896 c.481A>G p.I161V missense 0.00058480
60. 116280896 c.481A>C p.I161L missense 0.00000824
61. 116280895 c.482T>C p.I161T missense 0.00001647
62. 116280889 c.488A>T p.D163V missense 0.00000824
63. 116280886 c.491A>G p.Y164C missense 0.00001647
64. 116280881 c.496A>C p.K166Q missense 0.00000824
65. 116280874 c.503T>C p.I168T missense 0.00001647
66. 116280843 c.532+2T>C essential splice site 0.00000824
67. 116275601 c.533-6C>T splice site 0.00010718
68. 116275595 c.533A>G p.Y178C missense 0.00000824
69. 116275587 c.541G>C p.A181P missense 0.00000824
70. 116275587 c.541G>A p.A181T missense 0.00000824
71. 116275587 c.541delG p.Ala181LeufsTer29 frameshift 0.00000824
72. 116275586 c.542_548delCTTTTGA p.Ala181GlufsTer27 frameshift 0.00000824
73. 116275582 c.546delT frameshift 0.00004945
74. 116275581 c.547G>A p.E183K missense 0.00000824
75. 116275572 c.556G>A p.A186T missense 0.00000824
76. 116275565 c.563A>G p.H188R missense 0.00001648
77. 116275561 c.567C>G p.F189L missense 0.00069217
78. 116275550 c.578T>A p.I193N missense 0.00000824
79. 116275547 c.581A>C p.K194T missense 0.00000824
80. 116275539 c.589G>T p.A197S missense 0.00000824
81. 116275523 c.605G>C p.G202A missense 0.00000824
82. 116269749 c.607-6T>C splice site 0.00001708
83. 116269748 c.607-5T>A splice site 0.00000854
84. 116269735 c.615G>T p.K205N missense 0.00002537
85. 116269732 c.618delA p.Lys206AsnfsTer4 frameshift 0.00000844
86. 116269728 c.622T>C p.S208P missense 0.00000842
87. 116269718 c.632T>C p.M211T missense 0.00000840
88. 116269717 c.633G>T p.M211I missense 0.00000839
89. 116269711 c.639G>C p.E213D missense 0.00000838
90. 116269710 c.640G>T p.V214F missense 0.00000838
91. 116269710 c.640delG p.Val214LeufsTer28 frameshift 0.00000837
92. 116269701 c.649T>C p.Y217H missense 0.00000836
93. 116269700 c.650A>G p.Y217C missense 0.00001671
94. 116269683 c.667G>A p.E223K missense 0.00000836
95. 116269677 c.673A>G p.I225V missense 0.00001673
96. 116269659 c.691C>A p.P231T missense 0.00000839
97. 116269658 c.692C>T p.P231L missense 0.00000840
98. 116269645 c.705G>T p.E235D missense 0.00000845
99. 116269620 c.730C>T p.H244Y missense 0.00023270
100. 116269619 c.731A>G p.H244R missense 0.00829226
101. 116269617 c.733C>T p.Q245X nonsense 0.00001822
102. 116269612 c.737+1G>A essential splice site 0.00000941
103. 116269607 c.737+6T>A splice site 0.00005922
104. 116269607 c.737+6T>C splice site 0.00001974
105. 116268184 c.738-10_738-5delTTTTTT splice site 0.01099160
106. 116268184 c.738-10_738-8delTTT splice site 0.12500840
107. 116268184 c.738-10_738-9delTT splice site 0.10648739
108. 116268184 c.738-10_738-7delTTTT splice site 0.11119328
109. 116268184 c.738-10_738-6delTTTTT splice site 0.04504202
110. 116268184 c.738-10_738-5delTTTTTTinsTTTTT splice site 0.03198319
111. 116268173 c.739C>T p.P247S missense 0.00000841
112. 116268172 c.740C>G p.P247R missense 0.00000837
113. 116268172 c.740C>T p.P247L missense 0.00000837
114. 116268167 c.745C>G p.L249V missense 0.00000829
115. 116268164 c.748C>T p.R250C missense 0.00004961
116. 116268163 c.749G>T p.R250L missense 0.00000826
117. 116268163 c.749G>A p.R250H missense 0.00000826
118. 116268161 c.751C>T p.R251C missense 0.00000826
119. 116268160 c.752G>A p.R251H missense 0.00002487
120. 116268160 c.752G>T p.R251L missense 0.00000829
121. 116268155 c.757C>A p.R253S missense 0.00000825
122. 116268154 c.758G>A p.R253H missense 0.00008291
123. 116268148 c.764A>G p.E255G missense 0.00000825
124. 116268129 c.783G>A p.W261X nonsense 0.00000825
125. 116260516 c.784-1G>A essential splice site 0.00000824
126. 116260506 c.793T>G p.L265V missense 0.00000824
127. 116260490 c.809T>C p.I270T missense 0.00000824
128. 116260466 c.833A>G p.D278G missense 0.00000824
129. 116260464 c.835C>T p.P279S missense 0.00000824
130. 116260460 c.838+1G>A essential splice site 0.00000824
131. 116247921 c.839-8T>A splice site 0.00000873
132. 116247903 c.849A>C p.E283D missense 0.00001670
133. 116247892 c.860T>A p.I287N missense 0.00001655
134. 116247890 c.862C>G p.L288V missense 0.00000827
135. 116247883 c.869A>T p.Q290L missense 0.00003302
136. 116247882 c.870G>T p.Q290H missense 0.00000825
137. 116247878 c.874G>T p.A292S missense 0.00023925
138. 116247877 c.875C>A p.A292D missense 0.00000825
139. 116247875 c.877C>T p.R293W missense 0.00004948
140. 116247874 c.878G>A p.R293Q missense 0.00003299
141. 116247869 c.883A>T p.N295Y missense 0.00000824
142. 116247868 c.884A>G p.N295S missense 0.00000824
143. 116247859 c.893A>G p.N298S missense 0.00006593
144. 116247854 c.898G>A p.D300N missense 0.00001648
145. 116247854 c.898G>T p.D300Y missense 0.00000824
146. 116247833 c.919G>A p.D307N missense 0.00001648
147. 116247829 c.923C>T p.P308L missense 0.00004119
148. 116247826 c.926A>G p.D309G missense 0.00000824
149. 116247826 c.926A>T p.D309V missense 0.00000824
150. 116247824 c.928G>A p.D310N missense 0.00063438
151. 116247819 c.933T>A p.F311L missense 0.00000824
152. 116247808 c.939+5G>C splice site 0.00000824
153. 116247806 c.939+7G>T splice site 0.00000824
154. 116245613 c.943G>A p.V315I missense 0.00004837
155. 116245609 c.947C>T p.A316V missense 0.00002870
156. 116245607 c.949T>C p.Y317H missense 0.00000932
157. 116245585 c.971T>C p.I324T missense 0.00003556
158. 116245574 c.982A>G p.R328G missense 0.00001762
159. 116245571 c.985C>T p.P329S missense 0.00035216
160. 116245568 c.988C>G p.Q330E missense 0.00002637
161. 116245565 c.991A>T p.I331F missense 0.00000879
162. 116245537 c.1014+5G>C splice site 0.00000905
163. 116245534 c.1014+8T>A splice site 0.00000909
164. 116245533 c.1014+9C>T splice site 0.00668028
165. 116244050 c.1015-3C>T splice site 0.00004335
166. 116244047 c.1015G>A p.A339T missense 0.00000861
167. 116244040 c.1022G>A p.S341N missense 0.00000852
168. 116244034 c.1028G>A p.Trp343Ter nonsense 0.00001695
169. 116244031 c.1031T>A p.M344K missense 0.00001684
170. 116244030 c.1032G>A p.M344I missense 0.00000842
171. 116244016 c.1046A>T p.D349V missense 0.00003333
172. 116244011 c.1051G>A p.D351N missense 0.00001661
173. 116244010 c.1052A>G p.D351G missense 0.00008304
174. 116243981 c.1081T>A p.W361R missense 0.00000826
175. 116243969 c.1093G>C p.V365L missense 0.00000825
176. 116243965 c.1097T>C p.L366P missense 0.00000825
177. 116243940 c.1122T>A p.D374E missense 0.00000825
178. 116243936 c.1126G>T p.D376Y missense 0.00000825
179. 116243934 c.1128_1130delTGA p.Asp376del inframe 0.00003305
180. 116243931 c.1131A>T p.E377D missense 0.00015699
181. 116243931 c.1131_1139delAGATGATGA p.Glu377_Asp379del inframe 0.00000825
182. 116243931 c.1131_1133delAGA p.Glu377del inframe 0.00000826
183. 116243928 c.1134T>A p.D378E missense 0.00000826
184. 116243917 c.1145A>G p.D382G missense 0.00000825
185. 116243916 c.1146_1147insGAT p.Asp383dup inframe 0.00003318
186. 116243915 c.1147_1149delGAT p.Asp383del inframe 0.00042302
187. 116243914 c.1148A>G p.D383G missense 0.00009129
188. 116243912 c.1150A>C p.N384H missense 0.00000829
189. 116243897 c.1165G>T p.D389Y missense 0.00001651
190. 116243896 c.1166A>G p.D389G missense 0.00000825
191. 116243890 c.1172A>G p.D391G missense 0.00000825
192. 116243879 c.1183G>A p.D395N missense 0.00000825
193. 116243877 c.1185_1187delCGA p.Asp396del inframe 0.00549260
194. 116243876 c.1186G>A p.D396N missense 0.00008381
195. 116243868 c.1194_1196dupTGA p.Asp398dup inframe 0.00000824
196. 116243866 c.1196A>C p.E399A missense 0.00000824

* This highlights the relative frequency of the variant in the ExAC populations - Non-Finnish European, African, East Asian, South Asian, American and Finnish. Higher frequencies are denoted by darker shades of green, variants absent in a population are coloured light gray.

Genomic coordinates refer to the GRCh37 release of the human genome.