ELN splice variants in ExAC


The table below lists the ELN splice variants found in the ExAC population database. Click on each variant for more details, including presence in the 1000 Genomes and Exome Sequencing Project databases, a breakdown by ethnic class and the variant's role in inherited cardiac disease. Use the form below to customise the variant selection. The table can be sorted by variant location, variant type or ExAC frequency.




No. Genomic coord. Variant (CDS) Variant (Protein) Variant Type ExAC frequencyPopulations*
1. 73457506 c.427+8C>T splice site 0.01603872
2. 73480332 c.2086+5G>C splice site 0.00650035
3. 73450880 c.134-5C>A splice site 0.00050571
4. 73459547 c.470-5G>A splice site 0.00048171
5. 73449755 c.133+11T>C splice site 0.00040082
6. 73459542 c.470-10C>G splice site 0.00032407
7. 73480017 c.1994-7T>G splice site 0.00023094
8. 73482982 c.2132-5T>A splice site 0.00020615
9. 73456940 c.233-4G>A splice site 0.00019838
10. 73461997 c.644-8C>T splice site 0.00015650
11. 73477479 c.1787-4G>A splice site 0.00012293
12. 73455584 c.232+3G>A splice site 0.00011532
13. 73467645 c.1096+6C>A splice site 0.00010283
14. 73469098 c.1149C>T p.Y383Y splice site 0.00009061
15. 73477478 c.1787-5C>A splice site 0.00006257
16. 73459546 c.470-6C>T splice site 0.00005815
17. 73457502 c.427+4A>G splice site 0.00005598
18. 73457497 c.426G>A splice site 0.00005390
19. 73471042 c.1356C>T p.Y452Y splice site 0.00004983
20. 73462889 c.799+3G>C splice site 0.00004163
21. 73471003 c.1317C>T p.P439P splice site 0.00004142
22. 73482981 c.2132-6G>A splice site 0.00004123
23. 73452038 c.165G>A p.A55A splice site 0.00004088
24. 73457506 c.427+8C>A splice site 0.00004000
25. 73450879 c.134-6C>A splice site 0.00003316
26. 73457369 c.376+5G>A splice site 0.00003299
27. 73478030 c.1993+5G>C splice site 0.00003296
28. 73480334 c.2086+7G>T splice site 0.00003296
29. 73462053 c.685+7G>A splice site 0.00003295
30. 73477477 c.1787-6C>T splice site 0.00003172
31. 73466321 c.949+8C>T splice site 0.00002520
32. 73450878 c.134-7C>A splice site 0.00002488
33. 73470602 c.1152G>A splice site 0.00002477
34. 73449749 c.133+5C>T splice site 0.00001666
35. 73459544 c.470-8C>G splice site 0.00001662
36. 73477475 c.1787-8delC splice site 0.00001659
37. 73450879 c.134-6C>G splice site 0.00001658
38. 73466255 c.891C>T splice site 0.00001652
39. 73475474 c.1786+5G>A splice site 0.00001649
40. 73461999 c.644-6C>T splice site 0.00001647
41. 73477475 c.1787-8C>G splice site 0.00001635
42. 73477478 c.1787-5C>T splice site 0.00001564
43. 73442602 c.82+3A>T splice site 0.00001100
44. 73472033 c.1414+7C>A splice site 0.00000845
45. 73466322 c.949+9C>T splice site 0.00000841
46. 73472030 c.1414+4A>G splice site 0.00000838
47. 73457044 c.325+8G>A splice site 0.00000837
48. 73449751 c.133+7T>G splice site 0.00000834
49. 73449695 c.84G>A splice site 0.00000832
50. 73449695 c.84G>T splice site 0.00000832
51. 73471051 c.1357+8C>A splice site 0.00000831
52. 73459622 c.540A>C p.P180P splice site 0.00000830
53. 73462885 c.798C>T splice site 0.00000830
54. 73450880 c.134-5C>T splice site 0.00000829
55. 73450880 c.134-5C>G splice site 0.00000829
56. 73450878 c.134-7C>T splice site 0.00000829
57. 73456936 c.233-8C>T splice site 0.00000827
58. 73456940 c.233-4G>C splice site 0.00000827
59. 73467488 c.950-5C>G splice site 0.00000826
60. 73481058 c.2087-4G>A splice site 0.00000825
61. 73457369 c.376+5G>C splice site 0.00000825
62. 73466175 c.889+6A>G splice site 0.00000825
63. 73462465 c.686-7T>C splice site 0.00000825
64. 73457367 c.376+3A>T splice site 0.00000825
65. 73475472 c.1786+3G>A splice site 0.00000825
66. 73482980 c.2132-7C>T splice site 0.00000825
67. 73480065 c.2032+3G>A splice site 0.00000824
68. 73469042 c.1097-4C>G splice site 0.00000824
69. 73477944 c.1919-7T>A splice site 0.00000824
70. 73474462 c.1577-8_1577-7insCCC splice site 0.00000824
71. 73470771 c.1315+6C>A splice site 0.00000824
72. 73455543 c.197-3C>T splice site 0.00000824
73. 73480066 c.2032+4A>T splice site 0.00000824
74. 73469043 c.1097-3C>T splice site 0.00000824
75. 73457315 c.327C>A splice site 0.00000824
76. 73478032 c.1993+7G>C splice site 0.00000824
77. 73477948 c.1919-3C>T splice site 0.00000824
78. 73474695 c.1622-11_1622-8delTCTG splice site 0.00000824
79. 73480335 c.2086+8delT splice site 0.00000824
80. 73469105 c.1150+6T>C splice site 0.00000824
81. 73478033 c.1993+8T>G splice site 0.00000824
82. 73469038 c.1097-8C>G splice site 0.00000824
83. 73478029 c.1993+4A>T splice site 0.00000824

* This highlights the relative frequency of the variant in the ExAC populations - Non-Finnish European, African, East Asian, South Asian, American and Finnish. Higher frequencies are denoted by darker shades of green, variants absent in a population are coloured light gray.

Genomic coordinates refer to the GRCh37 release of the human genome.