HCN4 variants in ExAC


The table below lists the HCN4 variants found in the ExAC population database. Click on each variant for more details, including presence in the 1000 Genomes and Exome Sequencing Project databases, a breakdown by ethnic class and the variant's role in inherited cardiac disease. Use the form below to customise the variant selection. The table can be sorted by variant location, variant type or ExAC frequency.




No. Genomic coord. Variant (CDS) Variant (Protein) Variant Type ExAC frequencyPopulations*
1. 73660505 c.107G>A p.G36E missense 0.06130711
2. 73615097 c.3337A>G p.M1113V missense 0.02475090
3. 73615786 c.2648C>G p.P883R missense 0.00876676
4. 73624464 c.1371+8C>T splice site 0.00376045
5. 73616159 c.2275G>A p.V759I missense 0.00353324
6. 73615084 c.3350C>T p.P1117L missense 0.00315821
7. 73615603 c.2831C>T p.A944V missense 0.00218521
8. 73615777 c.2657C>T p.A886V missense 0.00111900
9. 73617673 c.1703G>C p.S568T missense 0.00108873
10. 73614857 c.3577G>C p.E1193Q missense 0.00098535
11. 73622045 c.1459G>A p.V487M missense 0.00082432
12. 73660194 c.418G>A p.G140S missense 0.00067114
13. 73614847 c.3587G>A p.R1196H missense 0.00065184
14. 73615634 c.2800C>T p.R934C missense 0.00060466
15. 73624600 c.1243G>A p.V415M missense 0.00051109
16. 73617293 c.1978+3G>T splice site 0.00050549
17. 73615969 c.2465C>T p.T822M missense 0.00043996
18. 73615589 c.2845C>T p.R949W missense 0.00041100
19. 73615304 c.3130C>T p.R1044W missense 0.00038491
20. 73660028 c.584C>T p.A195V missense 0.00038069
21. 73615424 c.3010C>T p.P1004S missense 0.00035108
22. 73660484 c.128C>T p.P43L missense 0.00034465
23. 73615604 c.2830G>A p.A944T missense 0.00033124
24. 73615630 c.2804C>T p.S935F missense 0.00032144
25. 73660203 c.409G>A p.A137T missense 0.00029291
26. 73615733 c.2701G>A p.A901T missense 0.00026302
27. 73635845 c.1090G>A p.D364N missense 0.00025544
28. 73615247 c.3187C>A p.P1063T missense 0.00025044
29. 73616425 c.2143+5G>T splice site 0.00022950
30. 73615456 c.2978C>T p.T993M missense 0.00021294
31. 73615363 c.3071G>T p.G1024V missense 0.00021100
32. 73616224 c.2210A>G p.Q737R missense 0.00020743
33. 73615303 c.3131G>A p.R1044Q missense 0.00020367
34. 73615301 c.3133G>A p.A1045T missense 0.00019826
35. 73624463 c.1371+9G>A splice site 0.00018969
36. 73614932 c.3502_3505delTTTG p.F1168Gfs*12 frameshift 0.00018747
37. 73660310 c.302C>T p.A101V missense 0.00018044
38. 73615704 c.2730C>A p.F910L missense 0.00016754
39. 73615028 c.3406G>A p.G1136S missense 0.00016038
40. 73660240 c.372C>G p.D124E missense 0.00015883
41. 73615229 c.3205C>T p.R1069W missense 0.00015613
42. 73615211 c.3223A>G p.T1075A missense 0.00014791
43. 73660302 c.310G>A p.G104S missense 0.00014775
44. 73615517 c.2917G>A p.G973R missense 0.00014622
45. 73660281 c.331G>A p.G111S missense 0.00014361
46. 73615255 c.3179C>A p.P1060H missense 0.00014229
47. 73660218 c.394A>C p.I132L missense 0.00013687
48. 73660403 c.209C>T p.S70L missense 0.00013554
49. 73660092 c.520C>T p.P174S missense 0.00012762
50. 73660418 c.194C>T p.T65M missense 0.00012519
51. 73615897 c.2537C>T p.P846L missense 0.00011909
52. 73615340 c.3094C>A p.P1032T missense 0.00011732
53. 73660439 c.173C>T p.P58L missense 0.00011701
54. 73617542 c.1738-6C>T splice site 0.00011535
55. 73615129 c.3305G>A p.R1102H missense 0.00011529
56. 73616014 c.2420G>A p.R807H missense 0.00010816
57. 73615630 c.2804C>A p.S935Y missense 0.00010715
58. 73615766 c.2668C>T p.P890S missense 0.00010599
59. 73614973 c.3461G>A p.R1154Q missense 0.00010325
60. 73660067 c.545C>T p.P182L missense 0.00010106
61. 73616510 c.2063A>G p.N688S missense 0.00009927
62. 73615237 c.3197C>A p.P1066H missense 0.00009901
63. 73660468 c.144C>G p.I48M missense 0.00009502
64. 73614829 c.3605A>G p.N1202S missense 0.00008739
65. 73615762 c.2672C>T p.S891L missense 0.00008668
66. 73660487 c.125A>C p.D42A missense 0.00008624
67. 73615912 c.2522C>T p.S841L missense 0.00008536
68. 73615678 c.2756C>G p.S919C missense 0.00008527
69. 73660488 c.124G>C p.D42H missense 0.00008418
70. 73616168 c.2266G>A p.A756T missense 0.00008329
71. 73617359 c.1915G>A p.V639M missense 0.00008238
72. 73660595 c.17C>T p.P6L missense 0.00008121
73. 73615232 c.3202C>T p.R1068C missense 0.00008114
74. 73615171 c.3263C>T p.A1088V missense 0.00008068
75. 73615601 c.2833C>T p.P945S missense 0.00007736
76. 73615387 c.3047C>T p.P1016L missense 0.00007651
77. 73615394 c.3040dupG p.Ala1014GlyfsTer180 frameshift 0.00007274
78. 73660512 c.100G>A p.E34K missense 0.00007221
79. 73615228 c.3206G>A p.R1069Q missense 0.00007219
80. 73660544 c.68C>T p.A23V missense 0.00006726
81. 73616252 c.2182G>A p.D728N missense 0.00006652
82. 73615225 c.3209G>A p.G1070D missense 0.00006623
83. 73615459 c.2975G>T p.S992I missense 0.00006508
84. 73614835 c.3599C>T p.P1200L missense 0.00006459
85. 73615588 c.2846G>A p.R949Q missense 0.00006406
86. 73615967 c.2467C>T p.P823S missense 0.00006151
87. 73616237 c.2197G>A p.V733I missense 0.00005813
88. 73615399 c.3035G>C p.G1012A missense 0.00005765
89. 73615370 c.3064C>T p.R1022X nonsense 0.00005751
90. 73615124 c.3310G>A p.A1104T missense 0.00005740
91. 73615531 c.2903C>T p.P968L missense 0.00005650
92. 73615637 c.2797G>A p.A933T missense 0.00005633
93. 73615037 c.3397G>C p.G1133R missense 0.00005596
94. 73615633 c.2801G>A p.R934H missense 0.00005591
95. 73615625 c.2809C>T p.Q937X nonsense 0.00005220
96. 73615093 c.3341C>T p.A1114V missense 0.00005218
97. 73660025 c.587C>G p.A196G missense 0.00005124
98. 73615216 c.3218C>T p.P1073L missense 0.00005065
99. 73615243 c.3191_3217delAGGTCCCCCAGCGCCGGGGCACACCCC p.Gln1064_Pro1072del inframe 0.00005065
100. 73615145 c.3289G>A p.G1097R missense 0.00005045
101. 73615145 c.3289G>T p.G1097W missense 0.00005045
102. 73615205 c.3229G>A p.G1077S missense 0.00004992
103. 73635940 c.995G>A p.R332Q missense 0.00004949
104. 73615375 c.3059C>T p.T1020I missense 0.00004926
105. 73615570 c.2864C>T p.P955L missense 0.00004914
106. 73615570 c.2864C>A p.P955Q missense 0.00004914
107. 73660278 c.334G>A p.G112S missense 0.00004873
108. 73615660 c.2774T>C p.L925P missense 0.00004870
109. 73614933 c.3501G>C p.L1167F missense 0.00004626
110. 73614974 c.3460C>T p.R1154W missense 0.00004622
111. 73660254 c.358G>A p.G120R missense 0.00004556
112. 73660271 c.341G>A p.G114E missense 0.00004508
113. 73660266 c.346G>A p.G116S missense 0.00004466
114. 73615061 c.3373G>A p.G1125S missense 0.00004393
115. 73615202 c.3232C>T p.R1078C missense 0.00004278
116. 73615055 c.3379G>A p.G1127R missense 0.00004165
117. 73615604 c.2830G>T p.A944S missense 0.00004140
118. 73635908 c.1027A>G p.M343V missense 0.00004120
119. 73614893 c.3541A>C p.T1181P missense 0.00003821
120. 73615595 c.2839G>A p.G947R missense 0.00003810
121. 73615390 c.3044C>G p.S1015C missense 0.00003669
122. 73616002 c.2432G>A p.G811E missense 0.00003592
123. 73615496 c.2938G>A p.G980R missense 0.00003473
124. 73615495 c.2939G>C p.G980A missense 0.00003444
125. 73615907 c.2527G>A p.A843T missense 0.00003414
126. 73616140 c.2294C>G p.A765G missense 0.00003361
127. 73615442 c.2992C>G p.P998A missense 0.00003356
128. 73659888 c.724C>T p.R242C missense 0.00003317
129. 73635946 c.989C>T p.P330L missense 0.00003299
130. 73617350 c.1924G>A p.V642M missense 0.00003296
131. 73635848 c.1087A>G p.I363V missense 0.00003296
132. 73617439 c.1835G>A p.R612H missense 0.00003295
133. 73617740 c.1636G>A p.D546N missense 0.00003295
134. 73615718 c.2716G>A p.G906R missense 0.00002921
135. 73660097 c.515C>G p.P172R missense 0.00002897
136. 73615400 c.3034G>A p.G1012R missense 0.00002848
137. 73615400 c.3034G>T p.G1012W missense 0.00002848
138. 73615037 c.3397G>A p.G1133R missense 0.00002798
139. 73616002 c.2432G>T p.G811V missense 0.00002694
140. 73615765 c.2669C>T p.P890L missense 0.00002694
141. 73614848 c.3586C>T p.R1196C missense 0.00002625
142. 73614844 c.3590C>G p.S1197C missense 0.00002594
143. 73614853 c.3581C>T p.P1194L missense 0.00002588
144. 73614835 c.3599C>A p.P1200Q missense 0.00002584
145. 73616108 c.2326C>A p.P776T missense 0.00002573
146. 73615927 c.2507C>T p.A836V missense 0.00002572
147. 73615031 c.3403C>T p.L1135F missense 0.00002509
148. 73615049 c.3385_3402delAGTGGGAGCAGCGGGGGC p.Ser1129_Gly1134del inframe 0.00002509
149. 73614904 c.3530G>A p.G1177E missense 0.00002503
150. 73616547 c.2026G>A p.D676N missense 0.00002490
151. 73636153 c.786-4G>A splice site 0.00002484
152. 73621933 c.1571G>A p.R524Q missense 0.00002475
153. 73622102 c.1402G>A p.A468T missense 0.00002475
154. 73635803 c.1132C>T p.R378C missense 0.00002474
155. 73635820 c.1115G>A p.R372Q missense 0.00002473
156. 73617719 c.1657G>A p.D553N missense 0.00002472
157. 73615406 c.3028G>A p.A1010T missense 0.00002366
158. 73614934 c.3500T>C p.L1167S missense 0.00002301
159. 73614944 c.3490C>G p.P1164A missense 0.00002249
160. 73614946 c.3488C>A p.P1163H missense 0.00002243
161. 73614947 c.3487C>A p.P1163T missense 0.00002239
162. 73615781 c.2653G>A p.G885R missense 0.00002164
163. 73615550 c.2884_2889delCCACCC p.Pro962_Pro963del inframe 0.00001992
164. 73660031 c.581C>T p.A194V missense 0.00001945
165. 73615538 c.2896delA p.Arg966AspfsTer19 frameshift 0.00001926
166. 73660015 c.597G>T p.Q199H missense 0.00001902
167. 73615532 c.2902C>T p.P968S missense 0.00001893
168. 73615021 c.3413C>T p.P1138L missense 0.00001892
169. 73615531 c.2903C>G p.P968R missense 0.00001883
170. 73615516 c.2918G>A p.G973E missense 0.00001815
171. 73616027 c.2407G>A p.A803T missense 0.00001803
172. 73616035 c.2399G>A p.R800H missense 0.00001802
173. 73616015 c.2419C>T p.R807C missense 0.00001799
174. 73616036 c.2398C>T p.R800C missense 0.00001797
175. 73616060 c.2374G>T p.A792S missense 0.00001780
176. 73615976 c.2458G>A p.G820R missense 0.00001773
177. 73615020 c.3414delT p.R1140Gfs*41 frameshift 0.00001743
178. 73615828 c.2606C>T p.A869V missense 0.00001717
179. 73615916 c.2518G>A p.A840T missense 0.00001711
180. 73616425 c.2143+5G>C splice site 0.00001700
181. 73616425 c.2143+5G>A splice site 0.00001700
182. 73616125 c.2309C>T p.T770M missense 0.00001692
183. 73615441 c.2993C>T p.P998L missense 0.00001687
184. 73615486 c.2948C>T p.S983F missense 0.00001675
185. 73616167 c.2267C>A p.A756E missense 0.00001666
186. 73615445 c.2989C>A p.P997T missense 0.00001665
187. 73660082 c.530C>T p.A177V missense 0.00001664
188. 73659820 c.785+7G>A splice site 0.00001664
189. 73617644 c.1732C>T p.R578W missense 0.00001657
190. 73622101 c.1403C>T p.A468V missense 0.00001650
191. 73635930 c.1005G>A p.M335I missense 0.00001649
192. 73636115 c.820G>A p.V274M missense 0.00001649
193. 73635941 c.994C>T p.R332W missense 0.00001649
194. 73635991 c.944G>A p.R315H missense 0.00001649
195. 73635872 c.1063A>G p.I355V missense 0.00001648
196. 73635841 c.1094C>T p.S365L missense 0.00001648
197. 73636022 c.913T>C p.F305L missense 0.00001648
198. 73635862 c.1073T>C p.I358T missense 0.00001648
199. 73617378 c.1896G>A p.M632I missense 0.00001647
200. 73617481 c.1793A>G p.N598S missense 0.00001647
201. 73617403 c.1871G>A p.R624Q missense 0.00001647
202. 73615465 c.2969C>T p.P990L missense 0.00001621
203. 73615013 c.3421C>T p.P1141S missense 0.00001567
204. 73615762 c.2672C>G p.S891W missense 0.00001445
205. 73660073 c.539A>C p.E180A missense 0.00001351
206. 73614860 c.3574C>T p.P1192S missense 0.00001298
207. 73614857 c.3577G>T p.E1193X nonsense 0.00001297
208. 73614851 c.3583G>T p.V1195L missense 0.00001295
209. 73614859 c.3575C>T p.P1192L missense 0.00001295
210. 73614839 c.3595C>A p.L1199M missense 0.00001294
211. 73615768 c.2666C>T p.S889F missense 0.00001291
212. 73615774 c.2660G>A p.C887Y missense 0.00001191
213. 73614933 c.3501G>T p.L1167F missense 0.00001157
214. 73614937 c.3497_3500delCTTT p.Ser1166CysfsTer14 frameshift 0.00001157
215. 73660053 c.559G>A p.A187T missense 0.00001117
216. 73660052 c.560C>A p.A187D missense 0.00001089
217. 73660050 c.562A>G p.I188V missense 0.00001070
218. 73660046 c.566A>G p.K189R missense 0.00001048
219. 73615784 c.2650C>T p.P884S missense 0.00001006
220. 73615787 c.2647C>T p.P883S missense 0.00000974
221. 73660031 c.581C>A p.A194E missense 0.00000973
222. 73615793 c.2641T>C p.S881P missense 0.00000921
223. 73615797 c.2637C>G p.S879R missense 0.00000902
224. 73616011 c.2423C>T p.P808L missense 0.00000898
225. 73616043 c.2391C>A p.H797Q missense 0.00000896
226. 73615997 c.2437G>A p.G813R missense 0.00000896
227. 73615987 c.2447A>G p.N816S missense 0.00000891
228. 73616078 c.2356G>A p.A786T missense 0.00000888
229. 73615972 c.2462A>G p.Q821R missense 0.00000881
230. 73615961 c.2473C>T p.H825Y missense 0.00000874
231. 73615951 c.2483G>A p.R828Q missense 0.00000868
232. 73615818 c.2616C>G p.S872R missense 0.00000864
233. 73659995 c.617T>C p.V206A missense 0.00000862
234. 73615825 c.2609G>A p.G870E missense 0.00000860
235. 73615934 c.2500C>T p.P834S missense 0.00000859
236. 73615829 c.2605G>C p.A869P missense 0.00000858
237. 73615829 c.2605G>A p.A869T missense 0.00000858
238. 73615916 c.2518G>C p.A840P missense 0.00000856
239. 73615863 c.2571C>G p.F857L missense 0.00000853
240. 73615906 c.2528C>A p.A843D missense 0.00000853
241. 73615871 c.2563T>C p.S855P missense 0.00000852
242. 73616120 c.2314G>A p.V772I missense 0.00000851
243. 73615879 c.2555C>T p.P852L missense 0.00000851
244. 73616120 c.2314G>C p.V772L missense 0.00000851
245. 73615889 c.2545delG p.Val849TrpfsTer23 frameshift 0.00000851
246. 73615874 c.2560T>C p.S854P missense 0.00000851
247. 73659987 c.625G>A p.G209S missense 0.00000850
248. 73616123 c.2311C>T p.P771S missense 0.00000848
249. 73616127 c.2307_2309delCAC p.Thr770del inframe 0.00000848
250. 73616129 c.2305C>T p.P769S missense 0.00000844
251. 73616435 c.2138G>A p.R713H missense 0.00000843
252. 73616138 c.2296A>G p.T766A missense 0.00000841
253. 73659972 c.640A>T p.M214L missense 0.00000841
254. 73616436 c.2137C>T p.R713C missense 0.00000841
255. 73659970 c.642G>T p.M214I missense 0.00000840
256. 73616146 c.2288C>A p.A763D missense 0.00000838
257. 73616576 c.1997G>A p.R666Q missense 0.00000838
258. 73659951 c.661A>G p.M221V missense 0.00000835
259. 73616570 c.2003G>A p.R668Q missense 0.00000835
260. 73616161 c.2273G>A p.R758H missense 0.00000835
261. 73616164 c.2270A>C p.H757P missense 0.00000834
262. 73616165 c.2269C>T p.H757Y missense 0.00000834
263. 73616278 c.2156C>A p.S719Y missense 0.00000833
264. 73616270 c.2164C>T p.L722F missense 0.00000833
265. 73635755 c.1180delC p.Leu394SerfsTer14 frameshift 0.00000832
266. 73659939 c.673G>A p.G225R missense 0.00000832
267. 73659822 c.785+5G>A splice site 0.00000832
268. 73659936 c.676G>A p.V226I missense 0.00000832
269. 73616179 c.2255T>C p.M752T missense 0.00000831
270. 73622133 c.1372-1G>A essential splice site 0.00000831
271. 73616185 c.2249G>A p.R750Q missense 0.00000831
272. 73616240 c.2194G>A p.G732S missense 0.00000831
273. 73659829 c.783C>A p.F261L missense 0.00000831
274. 73659915 c.697A>T p.M233L missense 0.00000830
275. 73616216 c.2218G>A p.E740K missense 0.00000830
276. 73616202 c.2232G>T p.Q744H missense 0.00000830
277. 73659917 c.695G>T p.R232M missense 0.00000830
278. 73616223 c.2211G>T p.Q737H missense 0.00000830
279. 73616550 c.2023G>A p.A675T missense 0.00000830
280. 73616191 c.2243A>T p.H748L missense 0.00000830
281. 73659885 c.727G>C p.E243Q missense 0.00000829
282. 73659869 c.743A>G p.K248R missense 0.00000829
283. 73617643 c.1733G>T p.R578L missense 0.00000829
284. 73616534 c.2039G>A p.R680H missense 0.00000829
285. 73622119 c.1385G>A p.G462E missense 0.00000827
286. 73621921 c.1583delA p.Gln528ArgfsTer46 frameshift 0.00000827
287. 73616504 c.2069A>G p.N690S missense 0.00000827
288. 73635775 c.1160G>A p.R387H missense 0.00000826
289. 73617312 c.1962C>G p.D654E missense 0.00000826
290. 73635981 c.954C>G p.I318M missense 0.00000825
291. 73617674 c.1702A>G p.S568G missense 0.00000825
292. 73636126 c.809dupT p.Leu271AlafsTer20 frameshift 0.00000825
293. 73621930 c.1574G>A p.R525H missense 0.00000825
294. 73635944 c.991C>A p.Q331K missense 0.00000825
295. 73635980 c.955G>A p.V319M missense 0.00000825
296. 73617715 c.1661A>G p.Y554C missense 0.00000824
297. 73617697 c.1679A>T p.Q560L missense 0.00000824
298. 73617515 c.1759C>T p.R587W missense 0.00000824
299. 73617478 c.1796C>T p.A599V missense 0.00000824
300. 73617332 c.1942A>G p.K648E missense 0.00000824
301. 73617385 c.1889A>C p.K630T missense 0.00000824
302. 73635812 c.1123C>T p.R375C missense 0.00000824
303. 73624603 c.1240G>A p.A414T missense 0.00000824
304. 73622030 c.1474G>A p.V492I missense 0.00000824
305. 73617760 c.1616C>A p.S539Y missense 0.00000824
306. 73617435 c.1839C>G p.F613L missense 0.00000824
307. 73635866 c.1069C>G p.L357V missense 0.00000824
308. 73624528 c.1315G>C p.V439L missense 0.00000824
309. 73617743 c.1633C>T p.P545S missense 0.00000824
310. 73617536 c.1738G>A p.E580K missense 0.00000824
311. 73635983 c.952A>G p.I318V missense 0.00000824
312. 73617337 c.1937G>A p.G646D missense 0.00000824
313. 73622037 c.1467G>A p.M489I missense 0.00000824
314. 73617703 c.1673G>A p.R558H missense 0.00000824
315. 73617677 c.1699G>A p.E567K missense 0.00000824
316. 73617440 c.1834C>T p.R612C missense 0.00000824
317. 73624539 c.1304T>C p.L435P missense 0.00000824
318. 73624576 c.1267G>A p.G423S missense 0.00000824
319. 73617745 c.1631C>T p.P544L missense 0.00000824
320. 73617434 c.1840G>A p.E614K missense 0.00000824
321. 73617410 c.1864A>G p.I622V missense 0.00000824
322. 73617340 c.1934A>G p.K645R missense 0.00000824
323. 73622018 c.1486A>G p.M496V missense 0.00000824
324. 73617764 c.1612A>G p.M538V missense 0.00000824
325. 73617710 c.1666G>A p.E556K missense 0.00000824
326. 73617678 c.1698G>C p.E566D missense 0.00000824
327. 73624471 c.1371+1G>T essential splice site 0.00000824
328. 73617510 c.1764G>C p.K588N missense 0.00000824
329. 73617455 c.1819A>G p.M607V missense 0.00000824
330. 73624546 c.1297G>A p.G433S missense 0.00000824
331. 73635906 c.1029G>A p.M343I missense 0.00000824
332. 73617728 c.1648C>T p.R550C missense 0.00000824
333. 73624594 c.1249C>G p.R417G missense 0.00000824
334. 73617753 c.1623C>A p.H541Q missense 0.00000824
335. 73617683 c.1693G>A p.D565N missense 0.00000824
336. 73617421 c.1853C>T p.P618L missense 0.00000824
337. 73624522 c.1321A>G p.M441V missense 0.00000824

* This highlights the relative frequency of the variant in the ExAC populations - Non-Finnish European, African, East Asian, South Asian, American and Finnish. Higher frequencies are denoted by darker shades of green, variants absent in a population are coloured light gray.

Genomic coordinates refer to the GRCh37 release of the human genome.