LAMA4 splice variants in ExAC

LAMA4 gene summary
LAMA4 variants in DCM

The table below lists the LAMA4 splice variants found in the ExAC population database. Click on each variant for more details, including presence in the 1000 Genomes and Exome Sequencing Project databases, a breakdown by ethnic class and the variant's role in inherited cardiac disease. Use the form below to customise the variant selection. The table can be sorted by variant location, variant type or ExAC frequency.




No. Genomic coord.✝ Variant (CDS)▼ Variant (Protein) Variant Type▼ ExAC frequency▼Populations*
1. 112575153 c.195+5A>G splice site 0.00001458●●●●●●
2. 112537679 c.196-9C>T splice site 0.00044286●●●●●●
3. 112537677 c.196-7G>A splice site 0.00000835●●●●●●
4. 112537561 c.297+8G>A splice site 0.00032998●●●●●●
5. 112522899 c.423-10C>T splice site 0.00461495●●●●●●
6. 112522893 c.423-4T>G splice site 0.01335667●●●●●●
7. 112513052 c.504A>G splice site 0.00000901●●●●●●
8. 112512833 c.718+5A>G splice site 0.00000850●●●●●●
9. 112512832 c.718+6G>T splice site 0.00003405●●●●●●
10. 112510411 c.719-4A>G splice site 0.00004177●●●●●●
11. 112510406 c.720G>A splice site 0.00001665●●●●●●
12. 112510334 c.792A>C splice site 0.00000827●●●●●●
13. 112510327 c.793+6G>A splice site 0.00000828●●●●●●
14. 112510327 c.793+6G>T splice site 0.00000828●●●●●●
15. 112508648 c.945+4C>A splice site 0.00001648●●●●●●
16. 112508647 c.945+5G>A splice site 0.00000824●●●●●●
17. 112506434 c.1056+5G>A splice site 0.00003295●●●●●●
18. 112499315 c.1168+8T>C splice site 0.00004127●●●●●●
19. 112496690 c.1169-8C>G splice site 0.00961665●●●●●●
20. 112496512 c.1336+3A>G splice site 0.00000824●●●●●●
21. 112496511 c.1336+4G>T splice site 0.03149717●●●●●●
22. 112496508 c.1336+7G>A splice site 0.00001648●●●●●●
23. 112494013 c.1337-7T>C splice site 0.00001755●●●●●●
24. 112493809 c.1530+4C>T splice site 0.00008246●●●●●●
25. 112493806 c.1530+7C>A splice site 0.00000825●●●●●●
26. 112493806 c.1530+7C>T splice site 0.00002474●●●●●●
27. 112493805 c.1530+8G>A splice site 0.00023092●●●●●●
28. 112486483 c.1531-5C>T splice site 0.00000824●●●●●●
29. 112486482 c.1531-4G>A splice site 0.00002471●●●●●●
30. 112486354 c.1647+8C>T splice site 0.00009062●●●●●●
31. 112486353 c.1647+9G>A splice site 0.00010710●●●●●●
32. 112480089 c.1648-7delT splice site 0.00019425●●●●●●
33. 112480086 c.1648-4T>C splice site 0.00000912●●●●●●
34. 112480085 c.1648-3T>C splice site 0.00000912●●●●●●
35. 112476916 c.1797-8A>G splice site 0.00002473●●●●●●
36. 112476767 c.1938T>C p.D646D splice site 0.00103001●●●●●●
37. 112476764 c.1938+3G>C splice site 0.00001648●●●●●●
38. 112476764 c.1938+3G>A splice site 0.00000824●●●●●●
39. 112476761 c.1938+6T>C splice site 0.00000824●●●●●●
40. 112476152 c.1939-3T>C splice site 0.00003299●●●●●●
41. 112476147 c.1941G>A p.A647A splice site 0.00026388●●●●●●
42. 112476048 c.2035+5A>G splice site 0.00000824●●●●●●
43. 112471706 c.2152+7A>T splice site 0.00000824●●●●●●
44. 112471705 c.2152+8T>A splice site 0.00001648●●●●●●
45. 112469544 c.2153-6G>A splice site 0.00000825●●●●●●
46. 112463502 c.2473-8C>T splice site 0.00000824●●●●●●
47. 112463500 c.2473-6C>T splice site 0.00001649●●●●●●
48. 112463321 c.2646C>T p.N882N splice site 0.00001649●●●●●●
49. 112463319 c.2646+2dupT splice site 0.00000825●●●●●●
50. 112463313 c.2646+8C>T splice site 0.00000825●●●●●●
51. 112462713 c.2647-8T>C splice site 0.00001670●●●●●●
52. 112462711 c.2647-6T>C splice site 0.00000833●●●●●●
53. 112462553 c.2792+7T>C splice site 0.00000824●●●●●●
54. 112462128 c.2793-4delA splice site 0.00000827●●●●●●
55. 112462128 c.2793-4A>G splice site 0.00000827●●●●●●
56. 112461954 c.2955+8A>G splice site 0.00000844●●●●●●
57. 112460315 c.3261+7A>G splice site 0.00001648●●●●●●
58. 112457461 c.3262-5C>G splice site 0.00000826●●●●●●
59. 112457459 c.3262-3C>G splice site 0.00016515●●●●●●
60. 112457318 c.3393+7delA splice site 0.00000826●●●●●●
61. 112455663 c.3536+6G>A splice site 0.00001652●●●●●●
62. 112455663 c.3536+6G>C splice site 0.00000826●●●●●●
63. 112454696 c.3537-7T>C splice site 0.00010717●●●●●●
64. 112454689 c.3537G>A splice site 0.00000824●●●●●●
65. 112454543 c.3675+8C>T splice site 0.00003297●●●●●●
66. 112454543 c.3675+8C>A splice site 0.00000824●●●●●●
67. 112454100 c.3676-8G>A splice site 0.00000826●●●●●●
68. 112454095 c.3676-3C>T splice site 0.00000826●●●●●●
69. 112453955 c.3813G>A p.G1271G splice site 0.00002515●●●●●●
70. 112453952 c.3813+3_3813+6delAAGT splice site 0.00000842●●●●●●
71. 112453950 c.3813+5G>A splice site 0.00000841●●●●●●
72. 112452165 c.3947+5A>G splice site 0.00000826●●●●●●
73. 112451249 c.3948-7T>C splice site 0.00000827●●●●●●
74. 112450120 c.4266+4A>G splice site 0.00004140●●●●●●
75. 112450118 c.4266+6A>G splice site 0.00000828●●●●●●
76. 112443407 c.4267-3T>C splice site 0.00002496●●●●●●
77. 112443210 c.4454+7T>G splice site 0.00000825●●●●●●
78. 112441679 c.4455-4C>A splice site 0.00002582●●●●●●
79. 112441479 c.4644+7T>C splice site 0.00000827●●●●●●
80. 112441478 c.4644+8G>T splice site 0.00035587●●●●●●
81. 112440351 c.4800+8A>G splice site 0.00000826●●●●●●
82. 112439104 c.4801-3C>T splice site 0.00050451●●●●●●
83. 112437202 c.4961-6C>T splice site 0.00000827●●●●●●
84. 112437199 c.4961-3delC splice site 0.00001652●●●●●●
85. 112437062 c.5091+4G>A splice site 0.00001648●●●●●●
86. 112437058 c.5091+8C>T splice site 0.00000824●●●●●●
87. 112435861 c.5185+5G>T splice site 0.00000826●●●●●●
88. 112435858 c.5185+8A>G splice site 0.00000826●●●●●●
89. 112435403 c.5186-5T>C splice site 0.00000826●●●●●●
90. 112435273 c.5305+6T>G splice site 0.23923374●●●●●●
91. 112435273 c.5305+6T>A splice site 0.00000825●●●●●●
92. 112435273 c.5305+6T>C splice site 0.00001650●●●●●●
93. 0 c.2956-12delT splice site 0.00021476●●●●●●

* This highlights the relative frequency of the variant in the ExAC populations - Non-Finnish European, African, East Asian, South Asian, American and Finnish. Higher frequencies are denoted by darker shades of green, variants absent in a population are coloured light gray.

✝ Genomic coordinates refer to the GRCh37 release of the human genome.