NF1 splice variants in ExAC

NF1 gene summary
NF1 variants in

The table below lists the NF1 splice variants found in the ExAC population database. Click on each variant for more details, including presence in the 1000 Genomes and Exome Sequencing Project databases, a breakdown by ethnic class and the variant's role in inherited cardiac disease. Use the form below to customise the variant selection. The table can be sorted by variant location, variant type or ExAC frequency.




No. Genomic coord.✝ Variant (CDS)▼ Variant (Protein) Variant Type▼ ExAC frequency▼Populations*
1. 29663499 c.6084+8C>G splice site 0.00142751●●●●●●
2. 29560021 c.3498C>T p.G1166G splice site 0.00124440●●●●●●
3. 29587544 c.4514+11C>G splice site 0.00088986●●●●●●
4. 29585352 c.4111-10_4111-8delTTG splice site 0.00055276●●●●●●
5. 29509520 c.731-6A>C splice site 0.00035902●●●●●●
6. 29663502 c.6084+11T>C splice site 0.00019809●●●●●●
7. 29665168 c.6756+11C>T splice site 0.00010711●●●●●●
8. 29509688 c.888+5G>A splice site 0.00009493●●●●●●
9. 29557945 c.3197+2_3197+3insA splice site 0.00007886●●●●●●
10. 29664383 c.6365-3C>T splice site 0.00006858●●●●●●
11. 29562621 c.3709-8G>C splice site 0.00005769●●●●●●
12. 29557274 c.2991-4A>G splice site 0.00005022●●●●●●
13. 29663499 c.6084+8C>T splice site 0.00004126●●●●●●
14. 29533394 c.1392+5G>T splice site 0.00004120●●●●●●
15. 29533395 c.1392+6A>T splice site 0.00004120●●●●●●
16. 29665161 c.6756+4C>T splice site 0.00004119●●●●●●
17. 29528425 c.1186-4A>G splice site 0.00003371●●●●●●
18. 29575998 c.3975-4G>A splice site 0.00003332●●●●●●
19. 29554629 c.2409+5G>C splice site 0.00003320●●●●●●
20. 29528052 c.1063-3T>C splice site 0.00003317●●●●●●
21. 29677344 c.7394+8G>T splice site 0.00003299●●●●●●
22. 29576141 c.4110+4T>C splice site 0.00003295●●●●●●
23. 29676131 c.7127-7T>G splice site 0.00002863●●●●●●
24. 29676133 c.7127-5T>C splice site 0.00002823●●●●●●
25. 29676139 c.7128G>A splice site 0.00002573●●●●●●
26. 29559715 c.3315-3C>T splice site 0.00002497●●●●●●
27. 29559907 c.3496+8C>T splice site 0.00002480●●●●●●
28. 29652835 c.4773-3T>C splice site 0.00002479●●●●●●
29. 29684279 c.7807-8C>A splice site 0.00002474●●●●●●
30. 29562932 c.3871-4G>C splice site 0.00002472●●●●●●
31. 29665164 c.6756+7G>C splice site 0.00002471●●●●●●
32. 29509691 c.888+8G>A splice site 0.00001919●●●●●●
33. 29546144 c.1641+8G>A splice site 0.00001893●●●●●●
34. 29685490 c.7908-8T>C splice site 0.00001728●●●●●●
35. 29664906 c.6641+8C>T splice site 0.00001723●●●●●●
36. 29670161 c.7126+8A>G splice site 0.00001685●●●●●●
37. 29670155 c.7126+2_7126+3insA splice site 0.00001679●●●●●●
38. 29557278 c.2991G>A splice site 0.00001672●●●●●●
39. 29559710 c.3315-8T>C splice site 0.00001670●●●●●●
40. 29662053 c.5943+4T>C splice site 0.00001665●●●●●●
41. 29663345 c.5944-6A>G splice site 0.00001659●●●●●●
42. 29685980 c.8051-7G>A splice site 0.00001656●●●●●●
43. 29490401 c.479+7G>A splice site 0.00001656●●●●●●
44. 29508725 c.655-3T>C splice site 0.00001654●●●●●●
45. 29701027 c.8315-4C>T splice site 0.00001652●●●●●●
46. 29554532 c.2326-9T>A splice site 0.00001651●●●●●●
47. 29679268 c.7395-7C>T splice site 0.00001650●●●●●●
48. 29576140 c.4110+3A>G splice site 0.00001648●●●●●●
49. 29533389 c.1392G>A p.P464P splice site 0.00001648●●●●●●
50. 29562925 c.3871-11C>T splice site 0.00001648●●●●●●
51. 29533260 c.1263C>T splice site 0.00001648●●●●●●
52. 29562932 c.3871-4G>A splice site 0.00001648●●●●●●
53. 29677202 c.7260T>G splice site 0.00001648●●●●●●
54. 29557854 c.3114-6C>T splice site 0.00000991●●●●●●
55. 29557854 c.3114-6C>G splice site 0.00000991●●●●●●
56. 29557856 c.3114-4A>G splice site 0.00000983●●●●●●
57. 29679439 c.7552+7T>C splice site 0.00000944●●●●●●
58. 29548951 c.1721+4T>A splice site 0.00000934●●●●●●
59. 29546139 c.1641+3A>G splice site 0.00000931●●●●●●
60. 29546139 c.1641+3delA splice site 0.00000929●●●●●●
61. 29497023 c.586+8T>C splice site 0.00000888●●●●●●
62. 29654508 c.5206-9A>G splice site 0.00000859●●●●●●
63. 29657524 c.5749+8A>G splice site 0.00000858●●●●●●
64. 29664901 c.6641+3A>G splice site 0.00000857●●●●●●
65. 29541610 c.1527+7_1527+8insT splice site 0.00000853●●●●●●
66. 29664829 c.6580-8T>A splice site 0.00000847●●●●●●
67. 29528423 c.1186-6C>A splice site 0.00000844●●●●●●
68. 29653277 c.5205+7T>C splice site 0.00000844●●●●●●
69. 29528423 c.1186-6C>T splice site 0.00000844●●●●●●
70. 29670160 c.7126+7A>G splice site 0.00000841●●●●●●
71. 29528431 c.1188C>T splice site 0.00000841●●●●●●
72. 29670157 c.7126+4A>C splice site 0.00000840●●●●●●
73. 29490197 c.289-7A>G splice site 0.00000838●●●●●●
74. 29508437 c.587-3C>T splice site 0.00000837●●●●●●
75. 29490198 c.289-6T>C splice site 0.00000837●●●●●●
76. 29662055 c.5943+6G>T splice site 0.00000833●●●●●●
77. 29592240 c.4662-7C>T splice site 0.00000833●●●●●●
78. 29557398 c.3111T>C p.F1037F splice site 0.00000832●●●●●●
79. 29556491 c.2850+8G>A splice site 0.00000832●●●●●●
80. 29592247 c.4662G>A p.R1554R splice site 0.00000832●●●●●●
81. 29556489 c.2850+6G>A splice site 0.00000832●●●●●●
82. 29554628 c.2409+4A>G splice site 0.00000830●●●●●●
83. 29486115 c.288+4A>C splice site 0.00000830●●●●●●
84. 29663348 c.5944-3T>C splice site 0.00000828●●●●●●
85. 29665827 c.6858+4A>G splice site 0.00000827●●●●●●
86. 29508720 c.655-8A>G splice site 0.00000827●●●●●●
87. 29508723 c.655-5T>C splice site 0.00000827●●●●●●
88. 29654865 c.5546+8T>C splice site 0.00000827●●●●●●
89. 29665828 c.6858+5T>C splice site 0.00000827●●●●●●
90. 29670019 c.7000-8delT splice site 0.00000826●●●●●●
91. 29550459 c.1722-3C>T splice site 0.00000826●●●●●●
92. 29588878 c.4661+3A>G splice site 0.00000826●●●●●●
93. 29687498 c.8098-7A>G splice site 0.00000826●●●●●●
94. 29701025 c.8315-6C>T splice site 0.00000826●●●●●●
95. 29585357 c.4111-5T>C splice site 0.00000825●●●●●●
96. 29588721 c.4515-8G>A splice site 0.00000825●●●●●●
97. 29670021 c.7000-6T>C splice site 0.00000825●●●●●●
98. 29588724 c.4515-5T>C splice site 0.00000825●●●●●●
99. 29657307 c.5547-7C>T splice site 0.00000825●●●●●●
100. 29683474 c.7553-4A>G splice site 0.00000825●●●●●●
101. 29670023 c.7000-4A>G splice site 0.00000825●●●●●●
102. 29562797 c.3870+7A>G splice site 0.00000824●●●●●●
103. 29587387 c.4368G>A p.R1456R splice site 0.00000824●●●●●●
104. 29533255 c.1261-3T>A splice site 0.00000824●●●●●●
105. 29483151 c.204+7A>G splice site 0.00000824●●●●●●
106. 29576140 c.4110+3A>C splice site 0.00000824●●●●●●
107. 29683975 c.7676-3C>T splice site 0.00000824●●●●●●
108. 29533396 c.1392+7T>C splice site 0.00000824●●●●●●
109. 29667515 c.6859-8T>C splice site 0.00000824●●●●●●

* This highlights the relative frequency of the variant in the ExAC populations - Non-Finnish European, African, East Asian, South Asian, American and Finnish. Higher frequencies are denoted by darker shades of green, variants absent in a population are coloured light gray.

✝ Genomic coordinates refer to the GRCh37 release of the human genome.