ABCA1
This page contains an overview of the genetic variation in the ABCA1 gene, including its role in inherited cardiac disease. For more details, click on the links below, or for a specific variant, enter the HGVS variant here:
ABCA1 gene and transcript details
Gene Name
ATP-binding cassette, sub-family A (ABC1), member 1
Gene Links
Ensembl: ENSG00000165029 -
Locus Reference Genomic:
Genomic Location
Chromosome 9 : 107,546,596 - 107,665,960 (reverse strand)
View in: Ensembl -
UCSC Genome Browser
| Canonical Seqs | Transcript (6783 bases) | Protein (2261 aa) |
|---|---|---|
 |
ENST00000374736 | ENSP00000363868 |
 |
||
 |
NM_005502.3 | |
 |
O95477 |
Summary of ABCA1 in Cardiomyopathies
ABCA1 variants in ExAC
Details of the protein-altering ABCA1 variants (missense, loss of function truncating, inframe indels and splice site regions) found in the ExAC database are shown below. To view lists of specific variants with links to detailed population frequency data, click on the variant numbers - for all or a particular variant class.
| Total Variants | Combined frequency of rare variants | |
|---|---|---|
| All Variants | 788 | 0.01153 |
| Truncating | 37 | 0.00033 |
| Missense | 644 | 0.00984 |
| Inframe | 1 | 0.00001 |
| Splice Site | 106 | 0.00135 |