LDB3 variants in ExAC


The table below lists the LDB3 variants found in the ExAC population database. Click on each variant for more details, including presence in the 1000 Genomes and Exome Sequencing Project databases, a breakdown by ethnic class and the variant's role in inherited cardiac disease. Use the form below to customise the variant selection. The table can be sorted by variant location, variant type or ExAC frequency.




No. Genomic coord. Variant (CDS) Variant (Protein) Variant Type ExAC frequencyPopulations*
1. 88428459 c.11G>A p.S4N missense 0.00000833
2. 88428461 c.13G>A p.V5M missense 0.00001665
3. 88428461 c.13_14insTGACCC p.Val5_Thr6insThrLeu inframe 0.00002498
4. 88428479 c.31G>A p.G11R missense 0.00000833
5. 88428491 c.43T>C p.F15L missense 0.00000833
6. 88428495 c.47G>A p.R16H missense 0.00010001
7. 88428502 c.54G>T p.Q18H missense 0.00003337
8. 88428503 c.55G>C p.G19R missense 0.00000834
9. 88428504 c.56G>C p.G19A missense 0.00001668
10. 88428524 c.76C>T p.P26S missense 0.00000837
11. 88428539 c.91C>T p.R31W missense 0.00005898
12. 88439127 c.97A>T p.T33S missense 0.00000825
13. 88439142 c.112G>A p.A38T missense 0.00000824
14. 88439166 c.136G>T p.G46C missense 0.00000824
15. 88439175 c.145G>A p.V49M missense 0.00002473
16. 88439175 c.145G>C p.V49L missense 0.00002473
17. 88439190 c.160G>A p.G54S missense 0.00004122
18. 88439193 c.163G>A p.V55I missense 0.00722224
19. 88439197 c.167A>G p.N56S missense 0.00000824
20. 88439208 c.178A>T p.M60L missense 0.00000825
21. 88439211 c.181A>C p.T61P missense 0.00000825
22. 88439214 c.184C>T p.H62Y missense 0.00000825
23. 88439242 c.212C>G p.S71C missense 0.00000826
24. 88439831 c.246-8T>A splice site 0.00001650
25. 88439835 c.246-4A>G splice site 0.00001650
26. 88439846 c.253C>T p.R85C missense 0.00002474
27. 88439847 c.254G>A p.R85H missense 0.00001649
28. 88439865 c.272C>T p.T91M missense 0.00003299
29. 88439873 c.280C>A p.P94T missense 0.00003299
30. 88439874 c.281C>T p.P94L missense 0.00001650
31. 88439883 c.290A>G p.Q97R missense 0.00000825
32. 88439888 c.295C>T p.P99S missense 0.00080127
33. 88439889 c.296C>T p.P99L missense 0.00001652
34. 88439895 c.302C>T p.P101L missense 0.00314283
35. 88439915 c.321+1G>A essential splice site 0.00001679
36. 88441184 c.322-9C>T splice site 0.00000858
37. 88441188 c.322-5G>T splice site 0.00000858
38. 88441199 c.328G>A p.A110T missense 0.00001716
39. 88441209 c.338C>T p.T113M missense 0.00002577
40. 88441214 c.343G>C p.G115R missense 0.00002577
41. 88441215 c.344G>A p.G115D missense 0.00007732
42. 88441223 c.352G>A p.V118M missense 0.00462955
43. 88441227 c.356C>T p.A119V missense 0.00000859
44. 88441229 c.358C>A p.P120T missense 0.00001719
45. 88441239 c.368G>A p.S123N missense 0.00001718
46. 88441244 c.373G>A p.E125K missense 0.00001718
47. 88441248 c.377C>G p.A126G missense 0.00000859
48. 88441258 c.387_395dupCCCAGGCAC p.Pro130_Thr132dup inframe 0.00022314
49. 88441258 c.387_395delCCCAGGCAC p.Pro130_Thr132del inframe 0.00003433
50. 88441266 c.395C>T p.T132I missense 0.00001718
51. 88441268 c.397C>T p.P133S missense 0.00000858
52. 88441269 c.398C>T p.P133L missense 0.00003433
53. 88441278 c.407C>T p.P136L missense 0.00003433
54. 88441280 c.409G>A p.E137K missense 0.00000858
55. 88441283 c.412C>G p.L138V missense 0.00002574
56. 88441286 c.415A>G p.R139G missense 0.00000858
57. 88441289 c.418C>G p.P140A missense 0.00000859
58. 88441293 c.422C>T p.T141I missense 0.00001714
59. 88441299 c.428G>T p.S143I missense 0.00000857
60. 88441304 c.433G>T p.A145S missense 0.00000858
61. 88441313 c.442C>T p.R148W missense 0.00012885
62. 88441314 c.443G>A p.R148Q missense 0.00001718
63. 88441322 c.451G>A p.A151T missense 0.00001719
64. 88441337 c.466G>A p.A156T missense 0.00067197
65. 88441340 c.469G>A p.E157K missense 0.00000862
66. 88441340 c.469G>C p.E157Q missense 0.00003448
67. 88441343 c.472G>T p.A158S missense 0.00000862
68. 88441343 c.472G>A p.A158T missense 0.00000862
69. 88441362 c.491C>T p.P164L missense 0.00001731
70. 88441364 c.493C>T p.R165W missense 0.00025954
71. 88441365 c.494G>A p.R165Q missense 0.00002590
72. 88441367 c.496G>T p.A166S missense 0.00000863
73. 88441379 c.508G>A p.A170T missense 0.00001720
74. 88441380 c.509C>T p.A170V missense 0.00000860
75. 88441384 c.513G>T p.K171N missense 0.00000859
76. 88441391 c.520C>T p.P174S missense 0.00000857
77. 88441396 c.525G>C p.E175D missense 0.00001711
78. 88441397 c.526G>A p.G176R missense 0.00006840
79. 88441401 c.530C>T p.A177V missense 0.00011101
80. 88441403 c.532C>G p.R178G missense 0.00006825
81. 88441403 c.532C>T p.R178W missense 0.00000853
82. 88441404 c.533G>A p.R178Q missense 0.00003408
83. 88441415 c.544G>A p.G182S missense 0.00002538
84. 88441421 c.550A>G p.K184E missense 0.00008435
85. 88441428 c.557T>C p.L186P missense 0.00000842
86. 88441431 c.560C>T p.P187L missense 0.00017658
87. 88441431 c.560C>A p.P187Q missense 0.00001682
88. 88441437 c.566C>T p.S189L missense 0.00057078
89. 88441446 c.575C>T p.P192L missense 0.00001672
90. 88441452 c.581A>T p.Q194L missense 0.00005846
91. 88441453 c.582A>C p.Q194H missense 0.00001670
92. 88441479 c.608C>T p.S203L missense 0.00002530
93. 88441481 c.610G>A p.A204T missense 0.00010122
94. 88441485 c.614A>C p.E205A missense 0.00000846
95. 88441486 c.615G>C p.E205D missense 0.00001695
96. 88441490 c.619C>G p.L207V missense 0.00000849
97. 88441496 c.625G>C p.E209Q missense 0.00000853
98. 88441506 c.635A>T p.Q212L missense 0.00000860
99. 88441517 c.646A>T p.M216L missense 0.00002596
100. 88441526 c.655C>T p.R219X nonsense 0.00003486
101. 88441527 c.656G>A p.R219Q missense 0.00005228
102. 88441535 c.664G>A p.A222T missense 0.00040299
103. 88441539 c.668C>T p.S223L missense 0.00003519
104. 88441547 c.676G>A p.G226R missense 0.00005316
105. 88441561 c.689+1G>A essential splice site 0.00000893
106. 88441570 c.689+10G>A splice site 0.00147331
107. 88451649 c.690-4A>G splice site 0.00235880
108. 88451658 c.695T>G p.L232R missense 0.00000825
109. 88451663 c.700A>G p.I234V missense 0.00000825
110. 88451664 c.701T>A p.I234N missense 0.00000825
111. 88451673 c.710T>G p.L237R missense 0.00000825
112. 88451676 c.713C>A p.A238D missense 0.00001649
113. 88451678 c.715G>A p.V239I missense 0.00018140
114. 88451678 c.715G>T p.V239L missense 0.00000825
115. 88451687 c.724G>A p.A242T missense 0.00004123
116. 88451696 c.733G>A p.V245I missense 0.00000824
117. 88451705 c.742G>A p.A248T missense 0.00000824
118. 88451707 c.744_745delTG p.Val249AspfsTer2 frameshift 0.00000824
119. 88451715 c.752A>G p.K251R missense 0.00664512
120. 88451727 c.764A>G p.K255R missense 0.00000824
121. 88451727 c.764_765insGCCAGAACAT p.Asp258HisfsTer5 frameshift 0.00000824
122. 88451731 c.768_770delAGA p.Glu257del inframe 0.00000824
123. 88451732 c.769G>C p.E257Q missense 0.00005771
124. 88451741 c.778G>A p.A260T missense 0.00000824
125. 88451747 c.784G>A p.E262K missense 0.00000825
126. 88451753 c.790G>A p.A264T missense 0.00000825
127. 88451756 c.793C>T p.R265C missense 0.00012370
128. 88451757 c.794G>A p.R265H missense 0.00013194
129. 88451759 c.796C>T p.R266C missense 0.00000825
130. 88451760 c.797G>A p.R266H missense 0.00001649
131. 88451763 c.800C>T p.S267F missense 0.00000825
132. 88451780 c.817C>T p.R273C missense 0.00002476
133. 88451781 c.818G>A p.R273H missense 0.00000825
134. 88451789 c.826C>T p.R276C missense 0.00000826
135. 88451790 c.827G>A p.R276H missense 0.00000826
136. 88451792 c.829A>T p.I277F missense 0.00001652
137. 88451808 c.845C>T p.T282M missense 0.00002486
138. 88451825 c.859+3G>C splice site 0.00000833
139. 88451830 c.859+8C>T splice site 0.00000835
140. 88452285 c.860-7C>T splice site 0.00002471
141. 88452300 c.868C>A p.P290T missense 0.00000824
142. 88452301 c.869C>T p.P290L missense 0.00000824
143. 88452309 c.877G>T p.E293X nonsense 0.00000824
144. 88452319 c.887G>A p.R296Q missense 0.00002471
145. 88452328 c.896G>A p.S299N missense 0.00000824
146. 88466278 c.897-10G>A splice site 0.00003363
147. 88466296 c.905T>C p.I302T missense 0.00003355
148. 88466305 c.914C>G p.A305G missense 0.00000839
149. 88466305 c.914C>A p.A305E missense 0.00001677
150. 88466331 c.940A>G p.T314A missense 0.00001676
151. 88466335 c.944C>T p.P315L missense 0.00004190
152. 88466336 c.945_972delGCTGCTGCCCGCTTCTGCCCAGCCACCT p.Ala319LeufsTer164 frameshift 0.00000838
153. 88466346 c.955G>A p.A319T missense 0.00007544
154. 88466358 c.967C>T p.P323S missense 0.00000839
155. 88466361 c.970C>T p.P324S missense 0.00000839
156. 88466362 c.971C>T p.P324L missense 0.00000839
157. 88466382 c.991G>A p.A331T missense 0.00001680
158. 88466383 c.992C>T p.A331V missense 0.00009239
159. 88466383 c.992C>A p.A331E missense 0.00000840
160. 88466388 c.997T>A p.S333T missense 0.00000840
161. 88466392 c.1001C>A p.P334Q missense 0.00004202
162. 88466398 c.1007delT p.Leu336ArgfsTer156 frameshift 0.00002522
163. 88466407 c.1016C>G p.A339G missense 0.00000843
164. 88466409 c.1018G>C p.A340P missense 0.00003373
165. 88466418 c.1027A>G p.T343A missense 0.00000849
166. 88466427 c.1036G>A p.A346T missense 0.00009476
167. 88466433 c.1042G>A p.A348T missense 0.00019926
168. 88466436 c.1045T>A p.S349T missense 0.00013059
169. 88466440 c.1049C>T p.T350I missense 0.00012237
170. 88466442 c.1051A>G p.T351A missense 0.00051044
171. 88466457 c.1066A>C p.S356R missense 0.00000933
172. 88466466 c.1075G>A p.D359N missense 0.00006983
173. 88469662 c.1086G>A splice site 0.00000851
174. 88469670 c.1094C>T p.A365V missense 0.00000850
175. 88469681 c.1105A>G p.S369G missense 0.00017023
176. 88469687 c.1111G>A p.A371T missense 0.00063088
177. 88469691 c.1115T>C p.V372A missense 0.00001705
178. 88469696 c.1120G>A p.A374T missense 0.00000851
179. 88469706 c.1130C>T p.A377V missense 0.00001702
180. 88469709 c.1133C>T p.P378L missense 0.00000851
181. 88469723 c.1147A>G p.S383G missense 0.00000853
182. 88469728 c.1152C>A p.Y384X nonsense 0.00000854
183. 88469729 c.1153A>G p.S385G missense 0.00000854
184. 88469736 c.1160G>T p.G387V missense 0.00000859
185. 88469742 c.1166C>G p.A389G missense 0.00000858
186. 88469763 c.1187G>A p.R396Q missense 0.00000863
187. 88469786 c.1210C>G p.R404G missense 0.00000874
188. 88469786 c.1210C>T p.R404W missense 0.00000874
189. 88469796 c.1220T>C p.V407A missense 0.00001765
190. 88469801 c.1225C>A p.Q409K missense 0.00019528
191. 88469806 c.1230A>T splice site 0.00000894
192. 88476105 c.1253C>G p.P418R missense 0.00012533
193. 88476105 c.1253C>T p.P418L missense 0.00000836
194. 88476108 c.1256C>A p.S419Y missense 0.00001672
195. 88476116 c.1264G>A p.A422T missense 0.00010882
196. 88476121 c.1269T>G p.N423K missense 0.00000838
197. 88476126 c.1274G>A p.S425N missense 0.00000840
198. 88476140 c.1288A>G p.T430A missense 0.00001807
199. 88476140 c.1288A>T p.T430S missense 0.00000903
200. 88476141 c.1289C>A p.T430N missense 0.00000878
201. 88476141 c.1289C>T p.T430I missense 0.00001755
202. 88476144 c.1292C>A p.P431H missense 0.00000905
203. 88476164 c.1312A>G p.T438A missense 0.00008327
204. 88476164 c.1312A>C p.T438P missense 0.00002082
205. 88476165 c.1313C>A p.T438N missense 0.00003831
206. 88476168 c.1316C>T p.P439L missense 0.00002106
207. 88476173 c.1321C>T p.P441S missense 0.00002011
208. 88476189 c.1337C>A p.T446N missense 0.00007335
209. 88476213 c.1361C>T p.T454I missense 0.00000872
210. 88476224 c.1372G>A p.A458T missense 0.00000846
211. 88476225 c.1373C>G p.A458G missense 0.00000843
212. 88476231 c.1379C>T p.A460V missense 0.00011717
213. 88476234 c.1382A>C p.Y461S missense 0.00001671
214. 88476237 c.1385C>T p.T462I missense 0.00000834
215. 88476249 c.1397C>T p.A466V missense 0.00000830
216. 88476255 c.1403A>G p.N468S missense 0.00002488
217. 88476263 c.1411C>T p.P471S missense 0.00008286
218. 88476266 c.1414G>C p.A472P missense 0.00000828
219. 88476270 c.1418C>A p.P473H missense 0.00000828
220. 88476279 c.1427C>T p.A476V missense 0.00000827
221. 88476282 c.1430A>G p.Y477C missense 0.00009100
222. 88476287 c.1435G>A p.G479R missense 0.00007445
223. 88476290 c.1438G>A p.G480S missense 0.00000827
224. 88476291 c.1439G>A p.G480D missense 0.00000827
225. 88476294 c.1442C>G p.P481R missense 0.00008270
226. 88476297 c.1445C>T p.A482V missense 0.00002481
227. 88476312 c.1460G>A p.R487H missense 0.00065289
228. 88476317 c.1465C>T p.P489S missense 0.00000826
229. 88476323 c.1471G>A p.V491M missense 0.00000826
230. 88476324 c.1472T>A p.V491E missense 0.00003305
231. 88476332 c.1480G>A p.D494N missense 0.00000826
232. 88476338 c.1486T>G p.F496V missense 0.00002479
233. 88476339 c.1487T>C p.F496S missense 0.00008264
234. 88476345 c.1493A>G p.Q498R missense 0.00001653
235. 88476354 c.1502C>T p.A501V missense 0.00002479
236. 88476357 c.1505C>T p.P502L missense 0.00000826
237. 88476366 c.1514G>A p.S505N missense 0.00000827
238. 88476368 c.1516delA p.Thr506ProfsTer59 frameshift 0.00000827
239. 88476372 c.1520C>A p.T507N missense 0.00001654
240. 88476381 c.1529G>A p.S510N missense 0.00002482
241. 88476387 c.1535A>C p.Q512P missense 0.00062910
242. 88476389 c.1537A>G p.T513A missense 0.00000828
243. 88476390 c.1538C>A p.T513N missense 0.00000828
244. 88476392 c.1540C>G p.L514V missense 0.00000828
245. 88476398 c.1546C>T p.R516W missense 0.00001658
246. 88476399 c.1547G>A p.R516Q missense 0.00001658
247. 88476399 c.1547G>T p.R516L missense 0.00000829
248. 88476414 c.1562A>G p.Y521C missense 0.00021605
249. 88476446 c.1594G>C p.A532P missense 0.00038602
250. 88476453 c.1601G>T p.G534V missense 0.00000844
251. 88476458 c.1606G>A p.V536I missense 0.00013574
252. 88476473 c.1621C>T p.R541X nonsense 0.00000881
253. 88476489 c.1637G>A p.S546N missense 0.00000957
254. 88476491 c.1639C>T p.R547W missense 0.00006774
255. 88476492 c.1640G>A p.R547Q missense 0.00009751
256. 88476506 c.1654G>A p.G552S missense 0.00004447
257. 88476506 c.1654G>C p.G552R missense 0.00001112
258. 88476507 c.1655G>T p.G552V missense 0.00001116
259. 88476519 c.1667A>G p.N556S missense 0.00001248
260. 88476524 c.1672A>G p.I558V missense 0.00060161
261. 88476527 c.1675C>T p.R559W missense 0.00008256
262. 88476528 c.1676G>A p.R559Q missense 0.00002780
263. 88476533 c.1676+5G>T splice site 0.00001473
264. 88476535 c.1676+7T>C splice site 0.00001514
265. 88477720 c.1677-1G>A essential splice site 0.00001655
266. 88477730 c.1686T>A p.F562L missense 0.00000825
267. 88477740 c.1696A>G p.M566V missense 0.00002473
268. 88477741 c.1697T>G p.M566R missense 0.00011541
269. 88477747 c.1703G>A p.R568H missense 0.00003296
270. 88477755 c.1711C>T p.H571Y missense 0.00000824
271. 88477758 c.1714C>A p.P572T missense 0.00002472
272. 88477780 c.1736A>G p.Y579C missense 0.00000824
273. 88477784 c.1740C>A p.C580X nonsense 0.00000824
274. 88477785 c.1741A>C p.K581Q missense 0.00000824
275. 88477789 c.1745C>G p.T582S missense 0.00000824
276. 88477826 c.1782C>A p.N594K missense 0.00000824
277. 88477830 c.1786G>A p.V596I missense 0.00002471
278. 88477833 c.1789T>C p.Y597H missense 0.00000824
279. 88477833 c.1789T>A p.Y597N missense 0.00001647
280. 88477842 c.1798C>T p.R600X nonsense 0.00004942
281. 88477843 c.1799G>A p.R600Q missense 0.00003295
282. 88477867 c.1823C>T p.P608L missense 0.00009061
283. 88477887 c.1843A>G p.T615A missense 0.00000824
284. 88477888 c.1844C>G p.T615S missense 0.00001648
285. 88477904 c.1857+3A>G splice site 0.00000824
286. 88478474 c.1858-10T>C splice site 0.00004122
287. 88478479 c.1858-5C>A splice site 0.00000824
288. 88478481 c.1858-3C>T splice site 0.00000824
289. 88478484 c.1858G>A p.E620K missense 0.00000824
290. 88478508 c.1882delA p.Thr628HisfsTer75 frameshift 0.00000824
291. 88478511 c.1885T>C p.W629R missense 0.00001648
292. 88478520 c.1894A>G p.T632A missense 0.00000824
293. 88478529 c.1903G>A p.V635I missense 0.00698874
294. 88478529 c.1903G>T p.V635F missense 0.00000824
295. 88478530 c.1904T>G p.V635G missense 0.00005769
296. 88478536 c.1910C>T p.A637V missense 0.00006594
297. 88478539 c.1913C>A p.A638D missense 0.00000824
298. 88478545 c.1919A>G p.K640R missense 0.00000824
299. 88478564 c.1938C>A p.S646R missense 0.00000825
300. 88478580 c.1954G>C p.D652H missense 0.00000826
301. 88478583 c.1957G>A p.G653R missense 0.00003303
302. 88478583 c.1957G>C p.G653R missense 0.00001652
303. 88478584 c.1958G>A p.G653E missense 0.00000826
304. 88478589 c.1963C>A p.P655T missense 0.00000826
305. 88478598 c.1972G>A p.E658K missense 0.00003311
306. 88478599 c.1973A>G p.E658G missense 0.00000828
307. 88478599 c.1973A>C p.E658A missense 0.00000828
308. 88478612 c.1978+8C>A splice site 0.00000831
309. 88485915 c.2000C>T p.T667I missense 0.00001649
310. 88485917 c.2002A>G p.K668E missense 0.00000824
311. 88485932 c.2017G>A p.D673N missense 0.00017304
312. 88485941 c.2026G>A p.V676M missense 0.00003296
313. 88485941 c.2026delG p.Val676TrpfsTer27 frameshift 0.00000824
314. 88485944 c.2029G>A p.E677K missense 0.00000824
315. 88485964 c.2049C>G p.I683M missense 0.00000824
316. 88485965 c.2050G>A p.E684K missense 0.00004945
317. 88485977 c.2062C>T p.H688Y missense 0.00000824
318. 88485989 c.2074G>A p.D692N missense 0.00002476
319. 88486007 c.2092G>A p.A698T missense 0.00030864
320. 88492651 c.2102A>G p.H701R missense 0.00000928
321. 88492653 c.2104G>T p.V702L missense 0.00000923
322. 88492666 c.2117G>T p.G706V missense 0.00000895
323. 88492668 c.2119C>T p.Q707X nonsense 0.00000892
324. 88492672 c.2123C>T p.P708L missense 0.00000886
325. 88492675 c.2126T>C p.F709S missense 0.00001763
326. 88492680 c.2131T>G p.S711A missense 0.00000879
327. 88492683 c.2134_2136delAAG p.Lys712del inframe 0.00001756
328. 88492699 c.2150T>G p.L717R missense 0.00006163
329. 88492705 c.2156A>C p.K719T missense 0.00000887
330. 88492712 c.2163C>A p.H721Q missense 0.00000896
331. 88492723 c.2174T>A p.I725N missense 0.00002778
332. 88492723 c.2174T>C p.I725T missense 0.00003703

* This highlights the relative frequency of the variant in the ExAC populations - Non-Finnish European, African, East Asian, South Asian, American and Finnish. Higher frequencies are denoted by darker shades of green, variants absent in a population are coloured light gray.

Genomic coordinates refer to the GRCh37 release of the human genome.