LDB3 variants in ExAC


The table below lists the LDB3 variants found in the ExAC population database. Click on each variant for more details, including presence in the 1000 Genomes and Exome Sequencing Project databases, a breakdown by ethnic class and the variant's role in inherited cardiac disease. Use the form below to customise the variant selection. The table can be sorted by variant location, variant type or ExAC frequency.




No. Genomic coord. Variant (CDS) Variant (Protein) Variant Type ExAC frequencyPopulations*
1. 88428539 c.91C>T p.R31W missense 0.00005898
2. 88428502 c.54G>T p.Q18H missense 0.00003337
3. 88428479 c.31G>A p.G11R missense 0.00000833
4. 88441437 c.566C>T p.S189L missense 0.00057078
5. 88441227 c.356C>T p.A119V missense 0.00000859
6. 88486007 c.2092G>A p.A698T missense 0.00030864
7. 88485941 c.2026G>A p.V676M missense 0.00003296
8. 88485932 c.2017G>A p.D673N missense 0.00017304
9. 88476524 c.1672A>G p.I558V missense 0.00060161
10. 88476387 c.1535A>C p.Q512P missense 0.00062910
11. 88466442 c.1051A>G p.T351A missense 0.00051044
12. 88466440 c.1049C>T p.T350I missense 0.00012237
13. 88439175 c.145G>A p.V49M missense 0.00002473
14. 88439175 c.145G>C p.V49L missense 0.00002473
15. 88439190 c.160G>A p.G54S missense 0.00004122
16. 88439193 c.163G>A p.V55I missense 0.00722224
17. 88439847 c.254G>A p.R85H missense 0.00001649
18. 88439888 c.295C>T p.P99S missense 0.00080127
19. 88439889 c.296C>T p.P99L missense 0.00001652
20. 88439895 c.302C>T p.P101L missense 0.00314283
21. 88441223 c.352G>A p.V118M missense 0.00462955
22. 88441266 c.395C>T p.T132I missense 0.00001718
23. 88441269 c.398C>T p.P133L missense 0.00003433
24. 88441286 c.415A>G p.R139G missense 0.00000858
25. 88441293 c.422C>T p.T141I missense 0.00001714
26. 88441299 c.428G>T p.S143I missense 0.00000857
27. 88441337 c.466G>A p.A156T missense 0.00067197
28. 88441364 c.493C>T p.R165W missense 0.00025954
29. 88441365 c.494G>A p.R165Q missense 0.00002590
30. 88441397 c.526G>A p.G176R missense 0.00006840
31. 88441404 c.533G>A p.R178Q missense 0.00003408
32. 88441415 c.544G>A p.G182S missense 0.00002538
33. 88441431 c.560C>T p.P187L missense 0.00017658
34. 88441479 c.608C>T p.S203L missense 0.00002530
35. 88441506 c.635A>T p.Q212L missense 0.00000860
36. 88441535 c.664G>A p.A222T missense 0.00040299
37. 88441539 c.668C>T p.S223L missense 0.00003519
38. 88451673 c.710T>G p.L237R missense 0.00000825
39. 88451676 c.713C>A p.A238D missense 0.00001649
40. 88451678 c.715G>A p.V239I missense 0.00018140
41. 88451705 c.742G>A p.A248T missense 0.00000824
42. 88451715 c.752A>G p.K251R missense 0.00664512
43. 88451727 c.764A>G p.K255R missense 0.00000824
44. 88451732 c.769G>C p.E257Q missense 0.00005771
45. 88451747 c.784G>A p.E262K missense 0.00000825
46. 88451753 c.790G>A p.A264T missense 0.00000825
47. 88451756 c.793C>T p.R265C missense 0.00012370
48. 88451757 c.794G>A p.R265H missense 0.00013194
49. 88451780 c.817C>T p.R273C missense 0.00002476
50. 88451792 c.829A>T p.I277F missense 0.00001652
51. 88451808 c.845C>T p.T282M missense 0.00002486
52. 88452319 c.887G>A p.R296Q missense 0.00002471
53. 88466335 c.944C>T p.P315L missense 0.00004190
54. 88466346 c.955G>A p.A319T missense 0.00007544
55. 88466361 c.970C>T p.P324S missense 0.00000839
56. 88466383 c.992C>T p.A331V missense 0.00009239
57. 88466427 c.1036G>A p.A346T missense 0.00009476
58. 88466436 c.1045T>A p.S349T missense 0.00013059
59. 88469681 c.1105A>G p.S369G missense 0.00017023
60. 88469687 c.1111G>A p.A371T missense 0.00063088
61. 88469691 c.1115T>C p.V372A missense 0.00001705
62. 88469801 c.1225C>A p.Q409K missense 0.00019528
63. 88476105 c.1253C>G p.P418R missense 0.00012533
64. 88476108 c.1256C>A p.S419Y missense 0.00001672
65. 88476116 c.1264G>A p.A422T missense 0.00010882
66. 88476121 c.1269T>G p.N423K missense 0.00000838
67. 88476126 c.1274G>A p.S425N missense 0.00000840
68. 88476140 c.1288A>G p.T430A missense 0.00001807
69. 88476164 c.1312A>G p.T438A missense 0.00008327
70. 88476189 c.1337C>A p.T446N missense 0.00007335
71. 88476231 c.1379C>T p.A460V missense 0.00011717
72. 88476249 c.1397C>T p.A466V missense 0.00000830
73. 88476287 c.1435G>A p.G479R missense 0.00007445
74. 88476291 c.1439G>A p.G480D missense 0.00000827
75. 88476312 c.1460G>A p.R487H missense 0.00065289
76. 88476324 c.1472T>A p.V491E missense 0.00003305
77. 88476338 c.1486T>G p.F496V missense 0.00002479
78. 88476339 c.1487T>C p.F496S missense 0.00008264
79. 88476372 c.1520C>A p.T507N missense 0.00001654
80. 88476446 c.1594G>C p.A532P missense 0.00038602
81. 88476458 c.1606G>A p.V536I missense 0.00013574
82. 88476491 c.1639C>T p.R547W missense 0.00006774
83. 88476492 c.1640G>A p.R547Q missense 0.00009751
84. 88476519 c.1667A>G p.N556S missense 0.00001248
85. 88476527 c.1675C>T p.R559W missense 0.00008256
86. 88477780 c.1736A>G p.Y579C missense 0.00000824
87. 88477867 c.1823C>T p.P608L missense 0.00009061
88. 88478529 c.1903G>A p.V635I missense 0.00698874
89. 88478536 c.1910C>T p.A637V missense 0.00006594
90. 88478583 c.1957G>A p.G653R missense 0.00003303
91. 88478583 c.1957G>C p.G653R missense 0.00001652
92. 88478584 c.1958G>A p.G653E missense 0.00000826
93. 88476294 c.1442C>G p.P481R missense 0.00008270
94. 88466433 c.1042G>A p.A348T missense 0.00019926
95. 88439873 c.280C>A p.P94T missense 0.00003299
96. 88441209 c.338C>T p.T113M missense 0.00002577
97. 88441280 c.409G>A p.E137K missense 0.00000858
98. 88441313 c.442C>T p.R148W missense 0.00012885
99. 88441527 c.656G>A p.R219Q missense 0.00005228
100. 88451696 c.733G>A p.V245I missense 0.00000824
101. 88466305 c.914C>G p.A305G missense 0.00000839
102. 88466466 c.1075G>A p.D359N missense 0.00006983
103. 88469706 c.1130C>T p.A377V missense 0.00001702
104. 88469742 c.1166C>G p.A389G missense 0.00000858
105. 88476144 c.1292C>A p.P431H missense 0.00000905
106. 88476266 c.1414G>C p.A472P missense 0.00000828
107. 88476282 c.1430A>G p.Y477C missense 0.00009100
108. 88476414 c.1562A>G p.Y521C missense 0.00021605
109. 88477741 c.1697T>G p.M566R missense 0.00011541
110. 88478530 c.1904T>G p.V635G missense 0.00005769
111. 88492705 c.2156A>C p.K719T missense 0.00000887
112. 88492712 c.2163C>A p.H721Q missense 0.00000896
113. 88428459 c.11G>A p.S4N missense 0.00000833
114. 88428461 c.13G>A p.V5M missense 0.00001665
115. 88428491 c.43T>C p.F15L missense 0.00000833
116. 88428495 c.47G>A p.R16H missense 0.00010001
117. 88428503 c.55G>C p.G19R missense 0.00000834
118. 88428504 c.56G>C p.G19A missense 0.00001668
119. 88428524 c.76C>T p.P26S missense 0.00000837
120. 88439127 c.97A>T p.T33S missense 0.00000825
121. 88439142 c.112G>A p.A38T missense 0.00000824
122. 88439166 c.136G>T p.G46C missense 0.00000824
123. 88439197 c.167A>G p.N56S missense 0.00000824
124. 88439208 c.178A>T p.M60L missense 0.00000825
125. 88439211 c.181A>C p.T61P missense 0.00000825
126. 88439214 c.184C>T p.H62Y missense 0.00000825
127. 88439242 c.212C>G p.S71C missense 0.00000826
128. 88439846 c.253C>T p.R85C missense 0.00002474
129. 88439865 c.272C>T p.T91M missense 0.00003299
130. 88439874 c.281C>T p.P94L missense 0.00001650
131. 88439883 c.290A>G p.Q97R missense 0.00000825
132. 88441199 c.328G>A p.A110T missense 0.00001716
133. 88441214 c.343G>C p.G115R missense 0.00002577
134. 88441215 c.344G>A p.G115D missense 0.00007732
135. 88441229 c.358C>A p.P120T missense 0.00001719
136. 88441239 c.368G>A p.S123N missense 0.00001718
137. 88441244 c.373G>A p.E125K missense 0.00001718
138. 88441248 c.377C>G p.A126G missense 0.00000859
139. 88441268 c.397C>T p.P133S missense 0.00000858
140. 88441278 c.407C>T p.P136L missense 0.00003433
141. 88441283 c.412C>G p.L138V missense 0.00002574
142. 88441289 c.418C>G p.P140A missense 0.00000859
143. 88441304 c.433G>T p.A145S missense 0.00000858
144. 88441314 c.443G>A p.R148Q missense 0.00001718
145. 88441322 c.451G>A p.A151T missense 0.00001719
146. 88441340 c.469G>A p.E157K missense 0.00000862
147. 88441340 c.469G>C p.E157Q missense 0.00003448
148. 88441343 c.472G>T p.A158S missense 0.00000862
149. 88441343 c.472G>A p.A158T missense 0.00000862
150. 88441362 c.491C>T p.P164L missense 0.00001731
151. 88441367 c.496G>T p.A166S missense 0.00000863
152. 88441379 c.508G>A p.A170T missense 0.00001720
153. 88441380 c.509C>T p.A170V missense 0.00000860
154. 88441384 c.513G>T p.K171N missense 0.00000859
155. 88441391 c.520C>T p.P174S missense 0.00000857
156. 88441396 c.525G>C p.E175D missense 0.00001711
157. 88441401 c.530C>T p.A177V missense 0.00011101
158. 88441403 c.532C>G p.R178G missense 0.00006825
159. 88441403 c.532C>T p.R178W missense 0.00000853
160. 88441421 c.550A>G p.K184E missense 0.00008435
161. 88441428 c.557T>C p.L186P missense 0.00000842
162. 88441431 c.560C>A p.P187Q missense 0.00001682
163. 88441446 c.575C>T p.P192L missense 0.00001672
164. 88441452 c.581A>T p.Q194L missense 0.00005846
165. 88441453 c.582A>C p.Q194H missense 0.00001670
166. 88441481 c.610G>A p.A204T missense 0.00010122
167. 88441485 c.614A>C p.E205A missense 0.00000846
168. 88441486 c.615G>C p.E205D missense 0.00001695
169. 88441490 c.619C>G p.L207V missense 0.00000849
170. 88441496 c.625G>C p.E209Q missense 0.00000853
171. 88441517 c.646A>T p.M216L missense 0.00002596
172. 88441547 c.676G>A p.G226R missense 0.00005316
173. 88451658 c.695T>G p.L232R missense 0.00000825
174. 88451663 c.700A>G p.I234V missense 0.00000825
175. 88451664 c.701T>A p.I234N missense 0.00000825
176. 88451678 c.715G>T p.V239L missense 0.00000825
177. 88451687 c.724G>A p.A242T missense 0.00004123
178. 88451741 c.778G>A p.A260T missense 0.00000824
179. 88451759 c.796C>T p.R266C missense 0.00000825
180. 88451760 c.797G>A p.R266H missense 0.00001649
181. 88451763 c.800C>T p.S267F missense 0.00000825
182. 88451781 c.818G>A p.R273H missense 0.00000825
183. 88451789 c.826C>T p.R276C missense 0.00000826
184. 88451790 c.827G>A p.R276H missense 0.00000826
185. 88452300 c.868C>A p.P290T missense 0.00000824
186. 88452301 c.869C>T p.P290L missense 0.00000824
187. 88452328 c.896G>A p.S299N missense 0.00000824
188. 88466296 c.905T>C p.I302T missense 0.00003355
189. 88466305 c.914C>A p.A305E missense 0.00001677
190. 88466331 c.940A>G p.T314A missense 0.00001676
191. 88466358 c.967C>T p.P323S missense 0.00000839
192. 88466362 c.971C>T p.P324L missense 0.00000839
193. 88466382 c.991G>A p.A331T missense 0.00001680
194. 88466383 c.992C>A p.A331E missense 0.00000840
195. 88466388 c.997T>A p.S333T missense 0.00000840
196. 88466392 c.1001C>A p.P334Q missense 0.00004202
197. 88466407 c.1016C>G p.A339G missense 0.00000843
198. 88466409 c.1018G>C p.A340P missense 0.00003373
199. 88466418 c.1027A>G p.T343A missense 0.00000849
200. 88466457 c.1066A>C p.S356R missense 0.00000933
201. 88469670 c.1094C>T p.A365V missense 0.00000850
202. 88469696 c.1120G>A p.A374T missense 0.00000851
203. 88469709 c.1133C>T p.P378L missense 0.00000851
204. 88469723 c.1147A>G p.S383G missense 0.00000853
205. 88469729 c.1153A>G p.S385G missense 0.00000854
206. 88469736 c.1160G>T p.G387V missense 0.00000859
207. 88469763 c.1187G>A p.R396Q missense 0.00000863
208. 88469786 c.1210C>G p.R404G missense 0.00000874
209. 88469786 c.1210C>T p.R404W missense 0.00000874
210. 88469796 c.1220T>C p.V407A missense 0.00001765
211. 88476105 c.1253C>T p.P418L missense 0.00000836
212. 88476140 c.1288A>T p.T430S missense 0.00000903
213. 88476141 c.1289C>A p.T430N missense 0.00000878
214. 88476141 c.1289C>T p.T430I missense 0.00001755
215. 88476164 c.1312A>C p.T438P missense 0.00002082
216. 88476165 c.1313C>A p.T438N missense 0.00003831
217. 88476168 c.1316C>T p.P439L missense 0.00002106
218. 88476173 c.1321C>T p.P441S missense 0.00002011
219. 88476213 c.1361C>T p.T454I missense 0.00000872
220. 88476224 c.1372G>A p.A458T missense 0.00000846
221. 88476225 c.1373C>G p.A458G missense 0.00000843
222. 88476234 c.1382A>C p.Y461S missense 0.00001671
223. 88476237 c.1385C>T p.T462I missense 0.00000834
224. 88476255 c.1403A>G p.N468S missense 0.00002488
225. 88476263 c.1411C>T p.P471S missense 0.00008286
226. 88476270 c.1418C>A p.P473H missense 0.00000828
227. 88476279 c.1427C>T p.A476V missense 0.00000827
228. 88476290 c.1438G>A p.G480S missense 0.00000827
229. 88476297 c.1445C>T p.A482V missense 0.00002481
230. 88476317 c.1465C>T p.P489S missense 0.00000826
231. 88476323 c.1471G>A p.V491M missense 0.00000826
232. 88476332 c.1480G>A p.D494N missense 0.00000826
233. 88476345 c.1493A>G p.Q498R missense 0.00001653
234. 88476354 c.1502C>T p.A501V missense 0.00002479
235. 88476357 c.1505C>T p.P502L missense 0.00000826
236. 88476366 c.1514G>A p.S505N missense 0.00000827
237. 88476381 c.1529G>A p.S510N missense 0.00002482
238. 88476389 c.1537A>G p.T513A missense 0.00000828
239. 88476390 c.1538C>A p.T513N missense 0.00000828
240. 88476392 c.1540C>G p.L514V missense 0.00000828
241. 88476398 c.1546C>T p.R516W missense 0.00001658
242. 88476399 c.1547G>A p.R516Q missense 0.00001658
243. 88476399 c.1547G>T p.R516L missense 0.00000829
244. 88476453 c.1601G>T p.G534V missense 0.00000844
245. 88476489 c.1637G>A p.S546N missense 0.00000957
246. 88476506 c.1654G>A p.G552S missense 0.00004447
247. 88476506 c.1654G>C p.G552R missense 0.00001112
248. 88476507 c.1655G>T p.G552V missense 0.00001116
249. 88476528 c.1676G>A p.R559Q missense 0.00002780
250. 88477730 c.1686T>A p.F562L missense 0.00000825
251. 88477740 c.1696A>G p.M566V missense 0.00002473
252. 88477747 c.1703G>A p.R568H missense 0.00003296
253. 88477755 c.1711C>T p.H571Y missense 0.00000824
254. 88477758 c.1714C>A p.P572T missense 0.00002472
255. 88477785 c.1741A>C p.K581Q missense 0.00000824
256. 88477789 c.1745C>G p.T582S missense 0.00000824
257. 88477826 c.1782C>A p.N594K missense 0.00000824
258. 88477830 c.1786G>A p.V596I missense 0.00002471
259. 88477833 c.1789T>C p.Y597H missense 0.00000824
260. 88477833 c.1789T>A p.Y597N missense 0.00001647
261. 88477843 c.1799G>A p.R600Q missense 0.00003295
262. 88477887 c.1843A>G p.T615A missense 0.00000824
263. 88477888 c.1844C>G p.T615S missense 0.00001648
264. 88478484 c.1858G>A p.E620K missense 0.00000824
265. 88478511 c.1885T>C p.W629R missense 0.00001648
266. 88478520 c.1894A>G p.T632A missense 0.00000824
267. 88478529 c.1903G>T p.V635F missense 0.00000824
268. 88478539 c.1913C>A p.A638D missense 0.00000824
269. 88478545 c.1919A>G p.K640R missense 0.00000824
270. 88478564 c.1938C>A p.S646R missense 0.00000825
271. 88478580 c.1954G>C p.D652H missense 0.00000826
272. 88478589 c.1963C>A p.P655T missense 0.00000826
273. 88478598 c.1972G>A p.E658K missense 0.00003311
274. 88478599 c.1973A>G p.E658G missense 0.00000828
275. 88478599 c.1973A>C p.E658A missense 0.00000828
276. 88485915 c.2000C>T p.T667I missense 0.00001649
277. 88485917 c.2002A>G p.K668E missense 0.00000824
278. 88485944 c.2029G>A p.E677K missense 0.00000824
279. 88485964 c.2049C>G p.I683M missense 0.00000824
280. 88485965 c.2050G>A p.E684K missense 0.00004945
281. 88485977 c.2062C>T p.H688Y missense 0.00000824
282. 88485989 c.2074G>A p.D692N missense 0.00002476
283. 88492651 c.2102A>G p.H701R missense 0.00000928
284. 88492653 c.2104G>T p.V702L missense 0.00000923
285. 88492666 c.2117G>T p.G706V missense 0.00000895
286. 88492672 c.2123C>T p.P708L missense 0.00000886
287. 88492675 c.2126T>C p.F709S missense 0.00001763
288. 88492680 c.2131T>G p.S711A missense 0.00000879
289. 88492699 c.2150T>G p.L717R missense 0.00006163
290. 88492723 c.2174T>A p.I725N missense 0.00002778
291. 88492723 c.2174T>C p.I725T missense 0.00003703
292. 88441526 c.655C>T p.R219X nonsense 0.00003486
293. 88452309 c.877G>T p.E293X nonsense 0.00000824
294. 88469728 c.1152C>A p.Y384X nonsense 0.00000854
295. 88476473 c.1621C>T p.R541X nonsense 0.00000881
296. 88477784 c.1740C>A p.C580X nonsense 0.00000824
297. 88477842 c.1798C>T p.R600X nonsense 0.00004942
298. 88492668 c.2119C>T p.Q707X nonsense 0.00000892
299. 88439835 c.246-4A>G splice site 0.00001650
300. 88451649 c.690-4A>G splice site 0.00235880
301. 88451825 c.859+3G>C splice site 0.00000833
302. 88477904 c.1857+3A>G splice site 0.00000824
303. 88441184 c.322-9C>T splice site 0.00000858
304. 88441570 c.689+10G>A splice site 0.00147331
305. 88466278 c.897-10G>A splice site 0.00003363
306. 88478474 c.1858-10T>C splice site 0.00004122
307. 88439831 c.246-8T>A splice site 0.00001650
308. 88441188 c.322-5G>T splice site 0.00000858
309. 88451830 c.859+8C>T splice site 0.00000835
310. 88452285 c.860-7C>T splice site 0.00002471
311. 88469662 c.1086G>A splice site 0.00000851
312. 88469806 c.1230A>T splice site 0.00000894
313. 88476533 c.1676+5G>T splice site 0.00001473
314. 88476535 c.1676+7T>C splice site 0.00001514
315. 88478479 c.1858-5C>A splice site 0.00000824
316. 88478481 c.1858-3C>T splice site 0.00000824
317. 88478612 c.1978+8C>A splice site 0.00000831
318. 88439915 c.321+1G>A essential splice site 0.00001679
319. 88441561 c.689+1G>A essential splice site 0.00000893
320. 88477720 c.1677-1G>A essential splice site 0.00001655
321. 88451707 c.744_745delTG p.Val249AspfsTer2 frameshift 0.00000824
322. 88451727 c.764_765insGCCAGAACAT p.Asp258HisfsTer5 frameshift 0.00000824
323. 88466336 c.945_972delGCTGCTGCCCGCTTCTGCCCAGCCACCT p.Ala319LeufsTer164 frameshift 0.00000838
324. 88466398 c.1007delT p.Leu336ArgfsTer156 frameshift 0.00002522
325. 88476368 c.1516delA p.Thr506ProfsTer59 frameshift 0.00000827
326. 88478508 c.1882delA p.Thr628HisfsTer75 frameshift 0.00000824
327. 88485941 c.2026delG p.Val676TrpfsTer27 frameshift 0.00000824
328. 88428461 c.13_14insTGACCC p.Val5_Thr6insThrLeu inframe 0.00002498
329. 88441258 c.387_395dupCCCAGGCAC p.Pro130_Thr132dup inframe 0.00022314
330. 88441258 c.387_395delCCCAGGCAC p.Pro130_Thr132del inframe 0.00003433
331. 88451731 c.768_770delAGA p.Glu257del inframe 0.00000824
332. 88492683 c.2134_2136delAAG p.Lys712del inframe 0.00001756

* This highlights the relative frequency of the variant in the ExAC populations - Non-Finnish European, African, East Asian, South Asian, American and Finnish. Higher frequencies are denoted by darker shades of green, variants absent in a population are coloured light gray.

Genomic coordinates refer to the GRCh37 release of the human genome.