CLCNKA

This page contains an overview of the genetic variation in the CLCNKA gene, including its role in inherited cardiac disease. For more details, click on the links below, or for a specific variant, enter the HGVS variant here:

CLCNKA gene and transcript details

Gene Name
chloride channel, voltage-sensitive Ka

Gene Links
Ensembl: ENSG00000186510 - Locus Reference Genomic:

Genomic Location
Chromosome 1 : 16,349,115 - 16,360,153 (forward strand)
View in: Ensembl - UCSC Genome Browser


Canonical Seqs Transcript (2061 bases)Protein (687 aa)
ENST00000331433 ENSP00000332771
NM_004070.3
P51800

Summary of CLCNKA in Cardiomyopathies


CLCNKA variants in ExAC

Details of the protein-altering CLCNKA variants (missense, loss of function truncating, inframe indels and splice site regions) found in the ExAC database are shown below. To view lists of specific variants with links to detailed population frequency data, click on the variant numbers - for all or a particular variant class.

Total VariantsCombined frequency of rare variants
All Variants3510.00523
Truncating360.00051
Missense2460.00370
Inframe40.00004
Splice Site650.00097

Rare variants are defined as having a mean allelic frequency of less than 0.0001.