PKP2 protein-altering variants in ExAC


The table below lists the PKP2 protein-altering variants found in the ExAC population database with a mean allelic frequency (MAF) less than 0.0001, classified for this study as a rare variant. Click on each variant for more details, including presence in the 1000 Genomes and Exome Sequencing Project databases, a breakdown by ethnic class and the variant's role in inherited cardiac disease. Use the form below to customise the variant selection. The table can be sorted by variant location, variant type or ExAC frequency.




No. Genomic coord. Variant (CDS) Variant (Protein) Variant Type ExAC frequencyPopulations*
1. 33030829 c.985A>T p.S329C missense 0.00009981
2. 33030861 c.953A>C p.H318P missense 0.00009923
3. 33031084 c.730C>G p.P244A missense 0.00009910
4. 33031266 c.548G>A p.S183N missense 0.00009887
5. 33031089 c.725C>T p.T242M missense 0.00009084
6. 32996161 c.1465G>A p.G489R missense 0.00008684
7. 33049610 c.56A>C p.Q19P missense 0.00008414
8. 32949229 c.2303A>C p.K768T missense 0.00008410
9. 33003847 c.1231G>A p.V411I missense 0.00008237
10. 32949050 c.2482G>A p.G828S missense 0.00008237
11. 32996164 c.1462G>A p.G488S missense 0.00008059
12. 33031408 c.406G>T p.V136L missense 0.00007501
13. 33031400 c.414A>T p.E138D missense 0.00007474
14. 33030850 c.964G>T p.G322C missense 0.00007451
15. 33030919 c.895C>T p.R299C missense 0.00007431
16. 32945663 c.2492A>G p.Y831C missense 0.00007415
17. 33031203 c.611G>A p.R204H missense 0.00007414
18. 32974306 c.2129C>T p.T710M missense 0.00006597
19. 33031341 c.473G>A p.R158K missense 0.00006597
20. 32975500 c.1872G>T p.E624D missense 0.00006593
21. 32974415 c.2020G>A p.V674M missense 0.00006593
22. 32974414 c.2021T>C p.V674A missense 0.00006592
23. 33031255 c.559G>A p.A187T missense 0.00006591
24. 33030873 c.941G>A p.G314E missense 0.00005784
25. 33030915 c.899C>A p.T300K missense 0.00005780
26. 32955432 c.2204G>A p.R735Q missense 0.00005766
27. 32945392 c.2612G>A p.R871Q missense 0.00005766
28. 32945603 c.2552C>T p.T851M missense 0.00005766
29. 32993981 c.1669A>G p.N557D missense 0.00005766
30. 32949068 c.2464A>G p.I822V missense 0.00005766
31. 32996139 c.1487T>A p.V496D missense 0.00005050
32. 33030886 c.928G>A p.V310M missense 0.00004955
33. 32949200 c.2332A>G p.I778V missense 0.00004949
34. 32955491 c.2146-1G>C essential splice site 0.00004944
35. 32955363 c.2273G>A p.R758Q missense 0.00004943
36. 32949098 c.2434G>A p.D812N missense 0.00004942
37. 32945631 c.2524G>A p.V842I missense 0.00004942
38. 32996128 c.1498C>T p.P500S missense 0.00004734
39. 32996241 c.1385C>G p.T462R missense 0.00004164
40. 33030831 c.983G>C p.G328A missense 0.00004159
41. 33030843 c.971_972insCT p.Ala325TrpfsTer28 frameshift 0.00004148
42. 33030846 c.968_969delAG p.Gln323ArgfsTer12 frameshift 0.00004145
43. 33030874 c.940G>A p.G314R missense 0.00004131
44. 33031026 c.788C>T p.T263M missense 0.00004129
45. 33031101 c.713C>T p.P238L missense 0.00004129
46. 32975561 c.1811C>T p.T604M missense 0.00004126
47. 32994035 c.1615C>G p.P539A missense 0.00004119
48. 33021962 c.1069G>A p.V357M missense 0.00004119
49. 33031204 c.610C>T p.R204C missense 0.00004119
50. 32993978 c.1672G>A p.V558I missense 0.00004119
51. 32949101 c.2431C>T p.R811C missense 0.00004118
52. 32996137 c.1489C>T p.R497X nonsense 0.00003606
53. 33030834 c.980G>T p.G327V missense 0.00003325
54. 33030976 c.838G>A p.V280I missense 0.00003305
55. 33031066 c.748C>T p.R250C missense 0.00003305
56. 33030876 c.938G>A p.S313N missense 0.00003304
57. 33031126 c.688G>A p.V230I missense 0.00003300
58. 33031350 c.464G>C p.S155T missense 0.00003299
59. 32975444 c.1928A>G p.K643R missense 0.00003297
60. 32974355 c.2080G>A p.V694I missense 0.00003297
61. 33031902 c.288T>G p.D96E missense 0.00003296
62. 32974373 c.2062T>C p.S688P missense 0.00003296
63. 33021950 c.1081G>A p.E361K missense 0.00003295
64. 32993990 c.1660A>G p.I554V missense 0.00003295
65. 32949166 c.2366T>A p.I789N missense 0.00003295
66. 32993999 c.1651G>A p.D551N missense 0.00003295
67. 32945618 c.2537C>T p.S846F missense 0.00003295
68. 33021986 c.1045A>G p.M349V missense 0.00003295
69. 33049472 c.194C>T p.A65V missense 0.00003207
70. 33049530 c.136C>A p.R46S missense 0.00003098
71. 33049589 c.77A>G p.D26G missense 0.00003089
72. 33049588 c.78C>A p.D26E missense 0.00003080
73. 32996122 c.1504C>T p.Q502X nonsense 0.00002854
74. 33049520 c.146A>G p.Q49R missense 0.00002829
75. 32996151 c.1475_1476insCT p.Arg493Ter frameshift 0.00002799
76. 33030790 c.1024T>C p.S342P missense 0.00002566
77. 33030804 c.1010G>A p.S337N missense 0.00002526
78. 33049443 c.223G>A p.G75R missense 0.00002480
79. 32994092 c.1558A>G p.I520V missense 0.00002479
80. 33031030 c.784C>A p.L262M missense 0.00002477
81. 32974301 c.2134G>A p.G712R missense 0.00002475
82. 32994067 c.1583C>T p.T528M missense 0.00002474
83. 32974441 c.1994C>G p.P665R missense 0.00002474
84. 32975415 c.1957A>G p.R653G missense 0.00002473
85. 32994062 c.1588A>G p.N530D missense 0.00002473
86. 32974351 c.2084G>A p.R695H missense 0.00002473
87. 33003888 c.1190T>A p.I397N missense 0.00002472
88. 32949166 c.2366T>C p.I789T missense 0.00002472
89. 33031194 c.620C>G p.T207S missense 0.00002472
90. 32975484 c.1888A>G p.I630V missense 0.00002472
91. 32949042 c.2489+1G>A essential splice site 0.00002471
92. 33003756 c.1322G>A p.R441Q missense 0.00002471
93. 33021967 c.1064G>A p.R355Q missense 0.00002471
94. 32945612 c.2543G>C p.W848S missense 0.00002471
95. 32949100 c.2432G>A p.R811H missense 0.00002471
96. 33031209 c.605T>C p.V202A missense 0.00002471
97. 32949083 c.2449G>A p.G817R missense 0.00002471
98. 32996166 c.1460A>G p.Q487R missense 0.00002008
99. 32996134 c.1492G>A p.D498N missense 0.00002006
100. 33049556 c.110A>G p.K37R missense 0.00001943
101. 32996184 c.1442C>T p.P481L missense 0.00001776
102. 32996202 c.1424T>G p.V475G missense 0.00001692
103. 32996211 c.1415C>T p.P472L missense 0.00001677
104. 32996242 c.1384A>G p.T462A missense 0.00001665
105. 33030832 c.982G>A p.G328R missense 0.00001663
106. 33030840 c.974C>T p.A325V missense 0.00001660
107. 33030843 c.971C>T p.A324V missense 0.00001659
108. 33030850 c.964G>A p.G322S missense 0.00001656
109. 33031074 c.740G>A p.G247E missense 0.00001656
110. 33031006 c.808C>T p.Q270X nonsense 0.00001652
111. 33030960 c.854C>T p.A285V missense 0.00001652
112. 33030925 c.889A>T p.S297C missense 0.00001651
113. 33030900 c.914G>A p.G305E missense 0.00001651
114. 33031954 c.236G>A p.R79Q missense 0.00001651
115. 33030921 c.893C>A p.T298N missense 0.00001651
116. 32974451 c.1984G>A p.V662M missense 0.00001650
117. 32994076 c.1574T>G p.L525R missense 0.00001650
118. 32974456 c.1979A>G p.Q660R missense 0.00001650
119. 32974345 c.2090A>G p.Y697C missense 0.00001649
120. 32977074 c.1711G>A p.D571N missense 0.00001649
121. 33031132 c.682G>A p.D228N missense 0.00001649
122. 32974358 c.2077A>G p.S693G missense 0.00001649
123. 32977077 c.1708G>A p.A570T missense 0.00001649
124. 33003897 c.1181T>A p.L394H missense 0.00001649
125. 32945393 c.2611C>T p.R871W missense 0.00001648
126. 33031892 c.298G>A p.G100S missense 0.00001648
127. 32974380 c.2055G>A p.M685I missense 0.00001648
128. 33031281 c.533T>C p.L178P missense 0.00001648
129. 33031260 c.554G>A p.R185Q missense 0.00001648
130. 33031916 c.274T>G p.L92V missense 0.00001648
131. 32975431 c.1941T>G p.C647W missense 0.00001648
132. 33031261 c.553C>T p.R185W missense 0.00001648
133. 33031246 c.568G>C p.V190L missense 0.00001648
134. 32975483 c.1889T>C p.I630T missense 0.00001648
135. 33031877 c.313C>G p.P105A missense 0.00001648
136. 33031212 c.602G>A p.G201E missense 0.00001648
137. 32994037 c.1613G>A p.W538X nonsense 0.00001648
138. 32945368 c.2636T>C p.L879P missense 0.00001648
139. 33031252 c.562C>G p.L188V missense 0.00001648
140. 32955364 c.2272C>T p.R758W missense 0.00001648
141. 33031228 c.586C>T p.R196C missense 0.00001648
142. 32974364 c.2071G>A p.A691T missense 0.00001648
143. 32975446 c.1926_1928delCAA inframe 0.00001648
144. 32955351 c.2285T>C p.L762P missense 0.00001648
145. 33031227 c.587G>A p.R196H missense 0.00001648
146. 33031298 c.516C>A p.S172R missense 0.00001648
147. 33031239 c.575C>T p.P192L missense 0.00001648
148. 33021904 c.1127T>C p.F376S missense 0.00001647
149. 33021983 c.1048G>A p.E350K missense 0.00001647
150. 33003762 c.1316T>G p.V439G missense 0.00001647
151. 33021887 c.1144T>C p.F382L missense 0.00001647
152. 32945595 c.2560C>T p.H854Y missense 0.00001647
153. 32993995 c.1655T>G p.F552C missense 0.00001647
154. 33003841 c.1237C>T p.R413X nonsense 0.00001647
155. 32994008 c.1642G>T p.G548C missense 0.00001647
156. 33049535 c.131G>A p.S44N missense 0.00001632
157. 32996142 c.1484G>A p.G495E missense 0.00001556
158. 32996146 c.1480T>G p.S494A missense 0.00001458
159. 33049444 c.222C>G p.N74K missense 0.00001238
160. 33049508 c.158G>A p.S53N missense 0.00001195
161. 33049457 c.209G>C p.S70T missense 0.00001134
162. 33049458 c.208A>G p.S70G missense 0.00001126
163. 33049499 c.167T>C p.I56T missense 0.00001110
164. 32996167 c.1459C>A p.Q487K missense 0.00000981
165. 32996172 c.1454G>T p.G485V missense 0.00000936
166. 33030786 c.1028A>G p.Q343R missense 0.00000861
167. 33031455 c.359A>C p.E120A missense 0.00000857
168. 33031449 c.365G>A p.R122H missense 0.00000855
169. 33031449 c.365G>T p.R122L missense 0.00000855
170. 33031450 c.364C>T p.R122C missense 0.00000855
171. 33031445 c.369G>A p.W123X nonsense 0.00000853
172. 33030801 c.1013C>A p.T338N missense 0.00000844
173. 32996217 c.1409G>C p.G470A missense 0.00000836
174. 32949225 c.2307A>T p.E769D missense 0.00000834
175. 32996239 c.1387G>A p.V463I missense 0.00000833
176. 33030829 c.985A>C p.S329R missense 0.00000832
177. 33031405 c.409G>A p.E137K missense 0.00000832
178. 33030834 c.980G>A p.G327E missense 0.00000831
179. 33030837 c.977C>A p.A326E missense 0.00000831
180. 32949221 c.2311C>G p.L771V missense 0.00000831
181. 32994133 c.1517T>C p.L506P missense 0.00000830
182. 32994140 c.1511-1G>T essential splice site 0.00000830
183. 33030838 c.976G>A p.A326T missense 0.00000830
184. 32994139 c.1511G>T p.G504V missense 0.00000830
185. 33030843 c.971C>G p.A324G missense 0.00000829
186. 33031065 c.749G>T p.R250L missense 0.00000828
187. 33031002 c.812T>G p.V271G missense 0.00000827
188. 33031960 c.230T>A p.L77H missense 0.00000827
189. 32994095 c.1555A>G p.M519V missense 0.00000827
190. 33030864 c.950C>T p.A317V missense 0.00000827
191. 32994103 c.1547A>C p.K516T missense 0.00000827
192. 33030952 c.862T>C p.S288P missense 0.00000826
193. 33003698 c.1378+2T>A essential splice site 0.00000826
194. 33030968 c.846G>C p.Q282H missense 0.00000826
195. 33030984 c.830T>C p.L277P missense 0.00000826
196. 33030955 c.859A>G p.R287G missense 0.00000826
197. 33030889 c.925G>A p.A309T missense 0.00000826
198. 32994089 c.1561A>G p.T521A missense 0.00000826
199. 33030928 c.886C>A p.H296N missense 0.00000826
200. 33031084 c.730C>T p.P244S missense 0.00000826
201. 33030964 c.850A>G p.R284G missense 0.00000826
202. 33030997 c.817C>T p.P273S missense 0.00000826
203. 33030918 c.896G>A p.R299H missense 0.00000826
204. 32994091 c.1559T>A p.I520K missense 0.00000826
205. 33031059 c.755T>C p.M252T missense 0.00000826
206. 33031009 c.805G>A p.G269R missense 0.00000826
207. 33030941 c.873T>A p.H291Q missense 0.00000826
208. 33031095 c.719T>C p.L240P missense 0.00000826
209. 33030997 c.817C>G p.P273A missense 0.00000826
210. 33031021 c.793G>A p.G265R missense 0.00000826
211. 33030880 c.934T>C p.S312P missense 0.00000826
212. 32977097 c.1689-1G>C essential splice site 0.00000826
213. 33031012 c.802G>T p.V268F missense 0.00000826
214. 33031357 c.457G>A p.D153N missense 0.00000825
215. 32994083 c.1567G>C p.A523P missense 0.00000825
216. 32975555 c.1817A>G p.N606S missense 0.00000825
217. 33031053 c.761A>C p.N254T missense 0.00000825
218. 33031364 c.450T>G p.I150M missense 0.00000825
219. 32975562 c.1810A>G p.T604A missense 0.00000825
220. 32949196 c.2336C>G p.P779R missense 0.00000825
221. 33031940 c.250C>T p.P84S missense 0.00000825
222. 33031347 c.467C>T p.P156L missense 0.00000825
223. 32974455 c.1980G>C p.Q660H missense 0.00000825
224. 33003895 c.1183C>T p.R395C missense 0.00000825
225. 32949197 c.2335C>G p.P779A missense 0.00000825
226. 32974457 c.1978C>T p.Q660X nonsense 0.00000825
227. 33031353 c.461G>A p.S154N missense 0.00000825
228. 32975551 c.1821dupT frameshift 0.00000825
229. 32977086 c.1699T>A p.S567T missense 0.00000825
230. 33003711 c.1367A>G p.K456R missense 0.00000825
231. 33031870 c.320C>T p.T107I missense 0.00000824
232. 32974429 c.2006G>T p.S669I missense 0.00000824
233. 32945411 c.2593A>G p.T865A missense 0.00000824
234. 32974324 c.2111G>A p.G704E missense 0.00000824
235. 32955425 c.2211G>A p.M737I missense 0.00000824
236. 32977061 c.1724C>G p.A575G missense 0.00000824
237. 32975468 c.1904G>A p.R635Q missense 0.00000824
238. 33031210 c.604delG p.Val202SerfsTer61 frameshift 0.00000824
239. 33021950 c.1081G>C p.E361Q missense 0.00000824
240. 32993972 c.1678G>A p.G560R missense 0.00000824
241. 33031216 c.598G>A p.V200M missense 0.00000824
242. 33031180 c.634C>T p.R212C missense 0.00000824
243. 32975511 c.1861G>A p.E621K missense 0.00000824
244. 32949116 c.2416A>G p.S806G missense 0.00000824
245. 32945628 c.2527C>T p.L843F missense 0.00000824
246. 32945651 c.2504A>G p.K835R missense 0.00000824
247. 32974360 c.2075A>G p.K692R missense 0.00000824
248. 33031332 c.482A>G p.Y161C missense 0.00000824
249. 32994017 c.1633A>G p.K545E missense 0.00000824
250. 32955468 c.2168C>T p.T723I missense 0.00000824
251. 32975497 c.1875delA p.Lys625AsnfsTer31 frameshift 0.00000824
252. 33021917 c.1114G>A p.A372T missense 0.00000824
253. 33021868 c.1163G>A p.R388Q missense 0.00000824
254. 32976997 c.1788T>G p.D596E missense 0.00000824
255. 32955345 c.2291A>G p.N764S missense 0.00000824
256. 32977076 c.1709C>T p.A570V missense 0.00000824
257. 33003727 c.1351G>A p.D451N missense 0.00000824
258. 32975421 c.1951C>T p.R651X nonsense 0.00000824
259. 32945660 c.2495C>T p.A832V missense 0.00000824
260. 32945398 c.2606A>C p.N869T missense 0.00000824
261. 33031897 c.293T>C p.V98A missense 0.00000824
262. 33021869 c.1162C>T p.R388W missense 0.00000824
263. 32945585 c.2570A>T p.Y857F missense 0.00000824
264. 32974314 c.2121G>T p.Q707H missense 0.00000824
265. 33031272 c.542A>C p.Q181P missense 0.00000824
266. 32955430 c.2206A>G p.K736E missense 0.00000824
267. 32955364 c.2272C>G p.R758G missense 0.00000824
268. 33031284 c.530C>T p.T177I missense 0.00000824
269. 32949044 c.2488G>C p.A830P missense 0.00000824
270. 32975535 c.1837A>C p.N613H missense 0.00000824
271. 33003894 c.1184G>C p.R395P missense 0.00000824
272. 32975420 c.1952G>A p.R651Q missense 0.00000824
273. 32945648 c.2507C>A p.A836E missense 0.00000824
274. 33031864 c.326A>T p.D109V missense 0.00000824
275. 32974386 c.2049A>G p.I683M missense 0.00000824
276. 32974361 c.2074A>T p.K692X nonsense 0.00000824
277. 33031877 c.313C>T p.P105S missense 0.00000824
278. 32994028 c.1622G>T p.G541V missense 0.00000824
279. 32955486 c.2150C>G p.P717R missense 0.00000824
280. 32975529 c.1843T>A p.S615T missense 0.00000824
281. 33021968 c.1063C>T p.R355X nonsense 0.00000824
282. 33021936 c.1095G>T p.M365I missense 0.00000824
283. 32977031 c.1754C>T p.S585L missense 0.00000824
284. 32955346 c.2290A>C p.N764H missense 0.00000824
285. 33003816 c.1262A>G p.N421S missense 0.00000824
286. 33031151 c.663C>A p.Y221X nonsense 0.00000824
287. 32955378 c.2258T>A p.L753Q missense 0.00000824
288. 32949104 c.2428G>A p.A810T missense 0.00000824
289. 32955343 c.2293G>C p.E765Q missense 0.00000824
290. 32945401 c.2603T>A p.V868D missense 0.00000824
291. 33031293 c.521C>T p.A174V missense 0.00000824
292. 33031273 c.541C>G p.Q181E missense 0.00000824
293. 33021978 c.1053G>T p.M351I missense 0.00000824
294. 32955448 c.2188G>A p.G730S missense 0.00000824
295. 32955403 c.2233G>T p.V745L missense 0.00000824
296. 32976987 c.1798G>A p.D600N missense 0.00000824
297. 32949179 c.2353A>G p.T785A missense 0.00000824
298. 32955414 c.2222G>T p.G741V missense 0.00000824
299. 32975424 c.1948A>G p.S650G missense 0.00000824
300. 32945653 c.2502C>G p.N834K missense 0.00000824
301. 33031931 c.259G>C p.V87L missense 0.00000824
302. 32975446 c.1926C>A p.N642K missense 0.00000824
303. 33031891 c.299G>A p.G100D missense 0.00000824
304. 33031865 c.325G>A p.D109N missense 0.00000824
305. 32945376 c.2628C>A p.Y876X nonsense 0.00000824
306. 32974321 c.2114C>T p.A705V missense 0.00000824
307. 32994051 c.1599C>G p.I533M missense 0.00000824
308. 32955487 c.2149C>T p.P717S missense 0.00000824
309. 32977035 c.1750G>C p.D584H missense 0.00000824
310. 33003786 c.1292T>C p.L431S missense 0.00000824
311. 33031258 c.556G>A p.A186T missense 0.00000824
312. 33021940 c.1091A>T p.H364L missense 0.00000824
313. 33031158 c.656G>A p.R219K missense 0.00000824
314. 33003879 c.1199T>A p.L400H missense 0.00000824
315. 32975538 c.1834C>T p.H612Y missense 0.00000824
316. 33003757 c.1321C>T p.R441W missense 0.00000824
317. 32975496 c.1876T>A p.Y626N missense 0.00000824
318. 32949110 c.2422C>G p.Q808E missense 0.00000824
319. 33031915 c.275T>C p.L92S missense 0.00000824
320. 32994013 c.1637C>G p.A546G missense 0.00000824
321. 32955466 c.2170G>A p.V724I missense 0.00000824
322. 33021901 c.1130T>C p.I377T missense 0.00000824
323. 32976990 c.1795C>A p.P599T missense 0.00000824
324. 32949184 c.2348C>T p.P783L missense 0.00000824
325. 32975453 c.1919A>G p.D640G missense 0.00000824
326. 32975469 c.1903C>T p.R635W missense 0.00000824
327. 32945654 c.2501A>G p.N834S missense 0.00000824

* This highlights the relative frequency of the variant in the ExAC populations - Non-Finnish European, African, East Asian, South Asian, American and Finnish. Higher frequencies are denoted by darker shades of green, variants absent in a population are coloured light gray.

Genomic coordinates refer to the GRCh37 release of the human genome.